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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KDIS_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.24
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLISQSVI NYVEEENIPA LKALLEKCKD VDERNECGQT PLMLAAEQGN VEIVKELLKN  60
   61 GANCNLEDLD NWTALISASK EGHIHIVEEL LKSGASLEHR DMGGWTALMW ACYKGRTDVV 120
  121 ELLLSHGANP SVTGLYSVYP IIWAAGRGHA DIVHLLLQNG AKVNCSDKYG TTPLVWAARK 180
  181 GHLECVKHLL AMGADVDQEG ANSMTALIVA VKGGYTQSVK EILKRNPNVN LTDKDGNTAL 240
  241 MIASKEGHIE IVQDLLDAGT YVNIPDRSGD TVLIGAVRGG HVEIVRALLQ KYADIDIRGQ 300
  301 DNKTALYWAV EKGNATMVRD ILQCNPDTEI CTKDGETPLI KATKMRNIEV VELLLDKGAK 360
  361 VSAVDKKGDT PLHVAIRGRS RRLAELLLRN PKDGRLLYRP NKAGETPYNI DCSHQKSILT 420
  421 QIFGARHLSP TETDGDMLGY DLYSSALADI LSEPTMQPPI CVGLYAQWGS GKSFLLKKLE 480
  481 DEMKTFAGQQ TEPLFQFSWL IVFLTLLLCG GLGLVFAFTV DTNLAIAISL SFLALIYIFF 540
  541 IVIYFGGRRE GESWNWAWAL STRLARHIGY LELLFKLMFV NPPELPEQTT KALPVRFLFT 600
  601 DYNRLSSVGG ETSLAEMIAT LSDACEREFG FLATRLFRVF RTEESQGKKK WKKTCCLPSF 660
  661 VIFLFIVGCI IAGITLLAIF RVDPKHLTVN AILISIASVV GLAFVLNCRT WWQVLDSLLN 720
  721 SQRKRLHSAA SKLHKLKSEG FMKVLKCEVE LMARMAKTID SFTQNQTRLV VIIDGLDACE 780
  781 QDKVLQMLDT VRVLFSKGPF IAIFASDPHI IIKAINQNLN SVLRDSNING HDYMRNIVHL 840
  841 PVFLNSRGLS NARKFLVTSA TNGDITCSDT TGTQEDTDRR VSQNSLGEMT KLGSKTALNR 900
  901 RDTYRRRQMQ RTITRQMSFD LTKLLVTEDW FSDISPQTMR RLLNIVSVTG RLLRANQITF 960
  961 NWDRLASWIN LTEQWPYRTS WLILYLEETE GLPDQMTLKT IYERISKNIP TTKDVEPLLE1020
 1021 IDGDIRNFEV FLSSRTPVLV ARDVKTFLPC TVNLDPKLRE IIADVRAARE QINIGGLAYP1080
 1081 PLPLHEGPPR PPSGYSQPAS VCSSASFNGP FPGGVVSPQP HSSYYSGLSG PQHPFYNRPF1140
 1141 FAPYLYTPRY YPGGSQHLIS RSSVKTSLPR DQNNGLPCDS GFNKQRQAAV PATGSSLLLS1200
 1201 SMTVDVVCEK LRQIEGLDQS MMPQYCTTIK KANINGRVLS QCNIDELKKE MAMNFGDWHL1260
 1261 FRSMVLEMRS VESQVVPEDP RFLNENSSAP VPHGESARRS SHTELPLTEL SSQTPYTLNF1320
 1321 SFEELNTLGL DEGAPRHSNL SWQSQTRRTP SLSSLNSQDS SIEISKLTDK VQAEYRDAYR1380
 1381 EYIAQMSQLE GGTGSSTISG RSSPHSTYYI GQSSSGGSIH STLEQERGKE GELKQEDGRK1440
 1441 SFLMKRGDVI DYSSSGVSTN EASPLDPITE EDEKSDQSGS KLLPGKKSSE RPSLFQTDLK1500
 1501 LKGGGLRYQK LPSDEDESGT EESDNTPLLK DDKDKKAEGK AERVCKSPEH SAEPIRTFIK1560
 1561 AKEYLSDALL DKKDSSDSGV RSNESSPNHS LHNEAADDSQ LEKANLIELE DEGHSGKRGM1620
 1621 PHSLSGLQDP IIARMSICSE DKKSPSECSL IASSPEESWP ACQKAYNLNR TPSTVTLNNN1680
 1681 TAPTNRANQN FDEIEGIRET SQVILRPGPS PNPTAVQNEN LKSMAHKRSQ RSSYTRLSKD1740
 1741 ASELHAASSE STGFGEERES IL

YRC Informatics Platform - Version 3.0
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