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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HNF1B_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSKLTSLQQ ELLSALLSSG VTKEVLIQAL EELLPSPNFG VKLETLPLSP GSGADLDTKP  60
   61 VFHTLTNGHA KGRLSGDEGS EDGDDYDTPP ILKELQALNT EEAAEQRAEV DRMLSEDPWR 120
  121 AAKMIKGYMQ QHNIPQREVV DVTGLNQSHL SQHLNKGTPM KTQKRAALYT WYVRKQREIL 180
  181 RQFNQTVQSS GNMTDKSSQD QLLFLFPEFS QQNQGPGQSE DACSEPTNKK MRRNRFKWGP 240
  241 ASQQILYQAY DRQKNPSKEE REALVEECNR AECLQRGVSP SKAHGLGSNL VTEVRVYNWF 300
  301 ANRRKEEAFR QKLAMDAYSS NQTHNLNPLL THGSPHHQPS SSPPNKLSGV RYSQPGNNEV 360
  361 TSSSTISHHG NSAMVTSQSV LQQVSPASLD PGHSLLSPDS KMISVSGGGL PPVSTLTNIH 420
  421 SLSHHNPQQS QNLIMTPLSG VMAIAQSLNT SQAQGVPVIN SVASSLAALQ PVQFSQQLHS 480
  481 PHQQPLMQQS PGSHMAQQPF MAAVTQLQNS HMYAHKQEPP QYSHTSRFPS AMVVTDTSSI 540
  541 NTLTSMSSSK QCPLQAW

YRC Informatics Platform - Version 3.0
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