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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCG2_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESKAYRFG AVLLLIHLIF LVPGTEAASF QRNQLLQKEP DLRLENVQKF PSPEMIRALE  60
   61 YIEKLRQQAH REESSPDYNP YQGISVPLQL KENGEESHLA ESSRDVLSED EWMRIILEAL 120
  121 RQAENEPPSA LKENKPYALN LEKNFPVDTP DDYETQQWPE RKLKHMRFPL MYEENSRENP 180
  181 FKRTNEIVEE QYTPQSLATL ESVFQELGKL TGPSNQKRER VDEEQKLYTD DEDDVYKTNN 240
  241 IAYEDVVGGE DWSPMEEKIE TQTQEEVRDS KENTEKNEQI NEEMKRSGHL GLPDEGNRKE 300
  301 SKDQLSEDAS KVITYLRRLV NAVGSGRSQS GQNGDRAARL LERPLDSQSI YQLIEISRNL 360
  361 QIPPEDLIEM LKAGEKPNGL VEPEQDLELA VDLDDIPEAD IDRPDMFQSK TLSKGGYPKA 420
  421 PGRGMMEALP DGLSVEDILN VLGMENVANQ KSPYFPNQYS RDKALLRLPY GPGKSRANQI 480
  481 PKVAWIPDVE SRQAPYDNLN DKDQELGEYL ARMLVKYPEL MNTNQLKRVP SPGSSEDDLQ 540
  541 EEEQLEQAIK EHLGQGSSQE MEKLAKVSKR IPAGSLKNED TPNRQYLDED MLLKVLEYLN 600
  601 QEQAEQGREH LAKRAMENM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle