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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157817588, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSTSNHLWL LSDILGQGAT ANVFRGRHKK TGDLYAVKVF NNISFLRPVD VQMREFEVLK  60
   61 KLNHKNIVKL FAIEEETTTR HKVLIMEFCP CGSLYTVLEE PSNAYGLPES EFLIVLRDVV 120
  121 GGMNHLRENG IVHRDIKPGN IMRVIGEDGQ SVYKLTDFGA ARELEDDEQF VSLYGTEEYL 180
  181 HPDMYERAVL RKDHQKKYGA TVDLWSVGVT FYHAATGSLP FRPFEGPRRN KEVMYKIITG 240
  241 KPSGAISGVQ KAENGPIDWS GDMPLSCSLS QGLQALLTPV LANILEADQE KCWGFDQFFA 300
  301 ETSDVLHRMV IHVFSLQHMT ALKIYIHSYN TAAVFHELVY KQTKIISSNQ ELIYEGRRLV 360
  361 LELGRLAQHF PKTTEENPIF VTSREQLNSI GLRYEKISLP KIHPRYDLDG DASMAKAVTG 420
  421 VVCYACRTAG TLLLYQELMR KGVRWLIELV KDDYNETVHK KTEVVITLDF CIRNIEKTVK 480
  481 VYEKLMKVSL DAAELGEISD IHTKLLRLSS SQGTIESSLQ DINSRLSPGG SLADTWAHQE 540
  541 GTHPRDRNVE KLQVLLNCIT EIYYQFKKDK AERRLAYNEE QIHKFDKQKL YYHATKAMTH 600
  601 FTDECVRKYE AFKDTSEEWM RKMLHLRKQL LSLTNQCFDI EEEVSKYQDY TNELQETLPQ 660
  661 KMLAASSGIK HTVAPIYPSS NTLVEMTLGM KKLKEEMEGV VKELAENNHI LERFGSLTMD 720
  721 GGLRNVDCL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle