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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NALD2_MOUSE
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPRHLRGL GMCITAVLAS FIAGFTVGWF IKPLKETTTS AGYHQSIQQK LLSEMKAENI  60
   61 RSFLRSFTKL PHLAGTEQNL LLAKKIQTQW KKFGLDSANL VHYDVLLSYP NETNANYVSI 120
  121 VDEHGVEIFK TSYLEPPPDG YENVTNIIPP YNAFSASGMP EGELVYVNYA RTEDFFKLER 180
  181 EMNINCTGKI VIARYGKIFR GNKVKNAMLA GAMGIILYSD PADYFAPDVQ PYPKGWNLPG 240
  241 AAAQRGNVLN LNGAGDPLTP GYPAKEYTFR LPVEEAVGIP NIPVHPIGYN DAERLLRNLG 300
  301 GAAPPDKSWK GSLNVSYNIG PGFTGSEYSR NIRMHVNNIN KITRIYNVIG TIRGSTEPDR 360
  361 YVILGGHRDS WVFGGIDPTT GTAVLQEIAR SFGKLVNGGW RPRRTIIFAS WDAEEFGLLG 420
  421 STEWAEENAK LLQERSIAYI NSDSAIEGNY TLRVDCTPLL NQLVYKVARE ISSPDDGFES 480
  481 KSLYESWLEK DPSPENKECP RINKLGSGSD FEAYFQRLGI ASGRARYTKN KKTDKYSSYP 540
  541 VYHTIYETFE LVQNFYDPTF KKQLSVAQLR GALVYELADS VVIPFNIQDY AKALKNYAAS 600
  601 IFNISKKHDQ QLRNHAVSFD PLFSAVKNFS EAASDFHRRL TQVDLNNPIA VRIMNDQQML 660
  661 LERAFIDPLG LPGRKFYRHI IFAPSSHNKY AGESFPGIYD AMFDIENKAD PSLAWAEVKK 720
  721 HISIAAFTIQ AAAGTLTNVL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle