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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CPDB_MOUSE, CP2D...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLTGAGLW SVAIFTVIFI LLVDLMHRHQ HWTSRCPPGP VPWPVLGNLL QVDLDNMPYS  60
   61 LYKLQNRYGD VFSLQMAWKP MVVINGLKAM KEMLLTCGED TADRPPVPIF EYLGVKPGSQ 120
  121 GVVLAPYGPE WREQRRFSVS TLRNFGLGKK SLEEWVTKEA RHLCDAFTAQ AGQPINPNPM 180
  181 LNKSTCNVIA SLIFARRFEY EDPFLIRMLK MLKECFTEIS GFIPGVLNEF PIFLRIPGLA 240
  241 DMVFQGQKSF MAILDNLLTE NRTTWDPDQP PRNLTDAFLA EIEKAKGNAE SSFNDENLRM 300
  301 VVLDLFTAGM VTTSTTLSWA LLLMILHPDV QRRVQQEIDA VIGQVQHPEM ADQARMPYTN 360
  361 AVIHEVQRFG TLLHCLCHAS QVVTFTQVQD FLVTKGSTLI PNLSSVLKGE TVWEKPLRFH 420
  421 PEHFLDAQGH FVKPEAFMPF SAGHRSCLGE ALARMELFLF FTCLLQRFSI SVPDGQPQPS 480
  481 NYRVHAIPVA PFPYQLCAVM HEQGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle