YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DPEP1_MOUSE, MDP...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIIWWFWSL LAICASDSFR DQAVAIMRTT PVIDGHNDLP WQLLNLFNNQ LLRPDADLNK  60
   61 LAQTHTNIPK LKAGFVGGQF WSAYMPCDTQ NKDAVKRILE QMDVIHRMCQ LYPETFMCVT 120
  121 NSSDILQAFR RGKVASLIGV EGGHLIDSSL GVLRTLYHLG MRYLTLTHNC NTPWADNWLV 180
  181 DRGDDEAESH GLSPFGKRLL NEMTRLGVMI DLSHVSVATM KDALQISRAP VIFSHSSAYS 240
  241 LCPHRRNVPD DVLQLVKNTS SLVMVNFFSN FVSCSDSATL PQVADHLDHI KKVAGAGAVG 300
  301 LGGDYDGVTM LPVGLEDVSK YPDLIAELLR RNWTETEVRG LLADNLIRVF SEVELVSSNM 360
  361 QSPEEVPITL KELDGSCRTY YGYSQAHSIH LQTGALVASL ASLLFRLHLL

Type	Start	End	Confidence
Signal Peptide	1	20	0.89
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	410	0.97