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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MA1A1_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVGGLLPLF SSPGGGGLGS GLGGGLGGGR KGSGPAAFRL TEKFVLLLVF SAFITLCFGA  60
   61 IFFLPDSSKL LSGVLFHSNP ALQPPAEHKP GLGARAEDAA EGRVRHREEG APGDPGAGLE 120
  121 DNLARIRENH ERALREAKET LQKLPEEIQR DILLEKEKVA QDQLRDKDLF RGLPKVDFLP 180
  181 PVGVENREPA DATIREKRAK IKEMMTHAWN NYKRYAWGLN ELKPISKEGH SSSLFGNIKG 240
  241 ATIVDALDTL FIMGMKTEFQ EAKSWIKKYL DFNVNAEVSV FEVNIRFVGG LLSAYYLSGE 300
  301 EIFRKKAVEL GVKLLPAFHT PSGIPWALLN MKSGIGRNWP WASGGSSILA EFGTLHLEFM 360
  361 HLSHLSGDPV FAEKVMKIRT VLNKLDKPEG LYPNYLNPSS GQWGQHHVSV GGLGDSFYEY 420
  421 LLKAWLMSDK TDLEAKKMYF DAVQAIETHL IRKSSGGLTY IAEWKGGLLE HKMGHLTCFA 480
  481 GGMFALGADG APEARAQHYL ELGAEIARTC HESYNRTYVK LGPEAFRFDG GVEAIATRQN 540
  541 EKYYILRPEV IETYMYMWRL THDPKYRTWA WEAVEALESH CRVNGGYSGL RDVYIARESY 600
  601 DDVQQSFFLA ETLKYLYLIF SDDDLLPLEH WIFNTEAHPF PILREQKKEI DGKEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle