YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TEN3_MOUSE
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVKERRPYC SLTKSRREKE RRYTNSSADN EECRVPTQKS YSSSETLKAF DHDYSRLLYG  60
   61 NRVKDLVHRE ADEYTRQGQN FTLRQLGVCE SATRRGVAFC AEMGLPHRGY SISAGSDADT 120
  121 ENEAVMSPEH AMRLWGRGVK SGRSSCLSSR SNSALTLTDT EHENRSDSES EQPSNNPGQP 180
  181 TLQPLPPSHK QHPAQHHPSI TSLNRNSLTN RRNQSPAPPA ALPAELQTTP ESVQLQDSWV 240
  241 LGSNVPLESR HFLFKTGTGT TPLFSTATPG YTMASGSVYS PPTRPLPRNT LSRSAFKFKK 300
  301 SSKYCSWRCT ALCAVGVSVL LAILLSYFIA MHLFGLNWHL QQTENDTFEN GKVNSDTVPT 360
  361 NTVSLPSGDN GKLGGFTHEN NTIDSGELDI GRRAIQEVPP GIFWRSQLFI DQPQFLKFNI 420
  421 SLQKDALIGV YGRKGLPPSH TQYDFVELLD GSRLIAREQR NLVESERAGR QARSVSLHEA 480
  481 GFIQYLDSGI WHLAFYNDGK NPEQVSFNTI VIESVVECPR NCHGNGECVS GTCHCFPGFL 540
  541 GPDCSRAACP VLCSGNGQYS KGRCLCFSGW KGTECDVPTT QCIDPQCGGR GICIMGSCAC 600
  601 NSGYKGENCE EADCLDPGCS NHGVCIHGEC HCNPGWGGSN CEILKTMCAD QCSGHGTYLQ 660
  661 ESGSCTCDPN WTGPDCSNEI CSVDCGSHGV CMGGSCRCEE GWTGPACNQR ACHPRCAEHG 720
  721 TCKDGKCECS QGWNGEHCTI AHYLDKIVKE GCPGLCNSNG RCTLDQNGWH CVCQPGWRGA 780
  781 GCDVAMETLC TDSKDNEGDG LIDCMDPDCC LQSSCQNQPY CRGLPDPQDI ISQSLQTPSQ 840
  841 QAAKSFYDRI SFLIGSDSTH VLPGESPFNK SLASVIRGQV LTADGTPLIG VNVSFLHYSE 900
  901 YGYTITRQDG MFDLVANGGA SLTLVFERSP FLTQYHTVWI PWNVFYVMDT LVMKKEENDI 960
  961 PSCDLSGFVR PSPIIVSSPL STFFRSSPED SPIIPETQVL HEETTIPGTD LKLSYLSSRA1020
 1021 AGYKSVLKIT MTQAVIPFNL MKVHLMVAVV GRLFQKWFPA SPNLAYTFIW DKTDAYNQKV1080
 1081 YGLSEAVVSV GYEYESCLDL TLWEKRTAVL QGYELDASNM GGWTLDKHHV LDVQNGILYK1140
 1141 GNGENQFISQ QPPVVSSIMG NGRRRSISCP SCNGQADGNK LLAPVALACG IDGSLYVGDF1200
 1201 NYVRRIFPSG NVTSVLELRN KDFRHSSNPA HRYYLATDPV TGDLYVSDTN TRRIYRPKSL1260
 1261 TGAKDLTKNA EVVAGTGEQC LPFDEARCGD GGKAVEATLM SPKGMAIDKN GLIYFVDGTM1320
 1321 IRKVDQNGII STLLGSNDLT SARPLTCDTS MHISQVRLEW PTDLAINPMD NSIYVLDNNV1380
 1381 VLQITENRQV RIAAGRPMHC QVPGVEYPVG KHAVQTTLES ATAIAVSYSG VLYITETDEK1440
 1441 KINRIRQVTT DGEISLVAGI PSECDCKNDA NCDCYQSGDG YAKDAKLNAP SSLAASPDGT1500
 1501 LYIADLGNIR IRAVSKNKPL LNSMNFYEVA SPTDQELYIF DINGTHQYTV SLVTGDYLYN1560
 1561 FSYSNDNDVT AVTDSNGNTL RIRRDPNRMP VRVVSPDNQV IWLTIGTNGC LKSMTAQGLE1620
 1621 LVLFTYHGNS GLLATKSDET GWTTFFDYDS EGRLTNVTFP TGVVTNLHGD MDKAITVDIE1680
 1681 SSSREEDVSI TSNLSSIDSF YTMVQDQLRN SYQIGYDGSL RIFYASGLDS HYQTEPHVLA1740
 1741 GTANPTVAKR NMTLPGENGQ NLVEWRFRKE QAQGKVNVFG RKLRVNGRNL LSVDFDRTTK1800
 1801 TEKIYDDHRK FLLRIAYDTS GHPTLWLPSS KLMAVNVTYS STGQIASIQR GTTSEKVDYD1860
 1861 SQGRIVSRVF ADGKTWSYTY LEKSMVLLLH SQRQYIFEYD MWDRLSAITM PSVARHTMQT1920
 1921 IRSIGYYRNI YNPPESNASI ITDYNEEGLL LQTAFLGTSR RVLFKYRRQT RLSEILYDST1980
 1981 RVSFTYDETA GVLKTVNLQS DGFICTIRYR QIGPLIDRQI FRFSEDGMVN ARFDYSYDNS2040
 2041 FRVTSMQGVI NETPLPIDLY QFDDISGKVE QFGKFGVIYY DINQIISTAV MTYTKHFDAH2100
 2101 GRIKEIQYEI FRSLMYWITI QYDNMGRVTK REIKIGPFAN TTKYAYEYDV DGQLQTVYLN2160
 2161 EKIMWRYNYD LNGNLHLLNP SSSARLTPLR YDLRDRITRL GDVQYRLDED GFLRQRGTEI2220
 2221 FEYSSKGLLT RVYSKGSGWT VIYRYDGLGR RVSSKTSLGQ HLQFFYADLT YPTRITHVYN2280
 2281 HSSSEITSLY YDLQGHLFAM EISSGDEFYI ASDNTGTPLA VFSSNGLMLK QTQYTAYGEI2340
 2341 YFDSNVDFQL VIGFHGGLYD PLTKLIHFGE RDYDILAGRW TTPDIEIWKR IGKDPAPFNL2400
 2401 YMFRNNNPAS KIHDVKDYIT DVNSWLVTFG FHLHNAIPGF PVPKFDLTEP SYELVKSQQW2460
 2461 EDVPPIFGVQ QQVARQAKAF LSLGKMAEVQ VSRRKAGAEQ SWLWFATVKS LIGKGVMLAV2520
 2521 SQGRVQTNVL NIANEDCIKV AAVLNNAFYL ENLHFTIEGK DTHYFIKTTT PESDLGTLRL2580
 2581 TSGRKALENG INVTVSQSTT VVNGRTRRFA DVEMQFGALA LHVRYGMTLD EEKARILEQA2640
 2641 RQRALARAWA REQQRVRDGE EGARLWTEGE KRQLLSAGKV QGYDGYYVLS VEQYPELADS2700
 2701 ANNIQFLRQS EIGKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle