YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2RX2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAQPRLPA GAAMVRRLAR GCWSAFWDYE TPKVIVVRNR RLGFVHRMVQ LLILLYFVWY  60
   61 VFIVQKSYQD SETGPESSII TKVKGITMSE HKVWDVEEYV KPPEGGSVVS IITRIEVTPS 120
  121 QTLGTCPESM RVHSSTCHLD DDCVAGQLDM QGNGIRTGRC VPYYHGDSKT CEVSAWCPVE 180
  181 DGTSENHFLG KMAPNFTILI KNSIHYPKFK FSKGNIASQK SDYLKHCTFD QDSDPYCPIF 240
  241 RLGFIVEQAG ENFTELAHKG GVIGVIINWN CDLDLSESEC NPKYSFRRLD PKYDPASSGY 300
  301 NFRFAKYYKI NGTTTTRTLI KAYGIRIDVI VHGQAGKFSL IPTIINLATA LTSIGVGSFL 360
  361 CDWILLTFMN KNKLYSHKKF DKVRTPRHPS SRWPVTLALV LGQIPPPPSH YSQDQPPSLP 420
  421 SGEGPALGEG AELPLAVQPP RSCSSSALTE QVVDTLDQHM GQRPPVPEPS QQDSTSTDPK 480
  481 GLAQL

Type	Start	End	Confidence
Cytoplasmic	1	42	0.92
Transmembrane Helix	43	63	0.86
Non-Cytoplasmic	64	346	0.99
Transmembrane Helix	347	369	0.66
Cytoplasmic	370	485	0.53