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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148689372, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELQRRDYHV ERPLLNQEQL EDLGHWGPAA KTHQWRTWFR CSRARAHSLL LQHVPVLGWL  60
   61 PRYPVREWLL GDLLSGLSVA IMQLPQGLAY ALLAGLPPMF GLYSSFYPVF IYFLFGTSRH 120
  121 ISVGTFAVMS VMVGSVTESL TADKAFVQGL NATADDARVQ VAYTLSFLVG LFQVGLGLVH 180
  181 FGFVVTYLSE PLVRSYTTAA SVQVLVSQLK YVFGIKLSSH SGPLSVIYTV LEVCAQLPET 240
  241 VPGTVVTAIV AGVALVLVKL LNEKLHRRLP LPIPGELLTL IGATGISYGV KLNDRFKVDV 300
  301 VGNITTGLIP PVAPKTELFA TLVGNAFAIA VVGFAIAISL GKIFALRHGY RVDSNQELVA 360
  361 LGLSNLIGGF FQCFPVSCSM SRSLVQESTG GNTQVAGAVS SLFILLIIVK LGELFRDLPK 420
  421 AVLAAVIIVN LKGMMKQFSD ICSLWKANRV DLLIWLVTFV ATILLNLDIG LAVSIVFSLL 480
  481 LVVVRMQLPH YSVLGQVPDT DIYRDVAEYS GAKEVPGVKV FRSSATLYFA NAELYSDSLK 540
  541 EKCGVDVDRL ITQKKKRIKK QEMKLKRMKK AKKSQKQDAS SKISSVSVNV NTNLEDVKSN 600
  601 DVEGSEAKVH QGEELQDVVS SNQEDAKAPT MTSLKSLGLP QPGFHSLILD LSTLSFVDTV 660
  661 CIKSLKNIFR DFREIEVEVY IAACYSPVVA QLEAGHFFDE SITKQHVFAS VHDAVTFALS 720
  721 HRKSVPKSPV LATKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle