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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DJC14_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKHPGERR LCGAHRSGGT SLSTSGSSVD PEILSFSGLR DSAETAPNGT RCLKEHSGPK  60
   61 YTQPPNPAHW SDPSHGPPRG PGPPRGGGYP DESETGSEES GVDQELSREN ETGYQEDGSP 120
  121 SFLSIPSACN CQGSPGVPEG TYSEEGDGSS SSLCHHCTSP ALGEDEELEE EYDDEEPLKF 180
  181 PSDFSRVSSG KKPLSRRQKH RFLIKEDVRD SGRREPKAPG RHRLARKRSQ TDKRRGLGLW 240
  241 GVEELCQLGQ AGFWWLIELL VLVGEYVETC GHLIYACRKL KGSDLDLFRV WVGVWARRLG 300
  301 GWARMMFQFL SQSFFCVVGL LIRILRVVGA FLLLALALFL GCLQLGWRFS VGLGNRLGWR 360
  361 DKTAWLFSWL GSPALHHCLT LLKDSRPWQQ LVRLIQWGWQ ELPWVKQRTK KQGNAPVASG 420
  421 RYCQPEEEVT RLLTMAGVPE DELNPFHVLG VEATASDTEL KKAYRQLAVM VHPDKNHHPR 480
  481 AEEAFKILRA AWDIVSNPER RKEYEMKRMA ENELSRSVNE FLSKLQDDLK EAMNTMMCSR 540
  541 CQGKHRRFEM DREPKSARYC AECNRLHPAE EGDFWAESSM LGLKITYFAL MDGKVYDITE 600
  601 WAGCQRVGIS PDTHRVPYHI SFGSRVPGTS GRQRATPESP PADLQDFLSR IFQVPPGPMS 660
  661 NGNFFAAPHP GPGTTSTSRP NSSVPKGEAK PKRRKKVRRP FQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle