YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: catp-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRKPQHPGR NGVVDIHESA GTSICSSSAD NTVTKEKAKR KRAEKEETDH GMTLHDIIKT  60
   61 SFVEHTLSVD QIRDLYPDSY VFPQCAERSD GLHSDEAKKR LKDGGLNQID RPQEPSLSRF 120
  121 FLSQFHFKFW ILLLGAAVLS VMTYFIHMAR GFNEPLNLYC AIILIAVVVF MGMLSYWQQA 180
  181 KAKKVLQENR DMMPVMSYVI RDCEEQEIKA DEIVVGDLVY LRAGYKIPAD MRILQANCLM 240
  241 IESHDVTGHR MPQEYKSDPV QANVSVFDAC NVAFMGSYCT EGEGIGIVIR TGKFTVLGAL 300
  301 ANQHHHIPPP SGRLQTELQN FSTFISIVAI SMATVVFFIG CFVARFENVL DHFIVGFVVI 360
  361 IVANVPQGLP ATVMSQLRII ARRMAQKNIL IKKLELIDEL GAATVICADK SGTLTMNQMV 420
  421 VTDLWFNSRL VTGQAVDLKH PHLRVMKASM KCPERLEEPL PDILTVMSVC NNGQFEHVRR 480
  481 GMRRVSTMRA MQKSASEAML SAHMKKKFTI VDTRTGQVSG QAGGVMKEAD QISETEPTEL 540
  541 GKKRVKPKKN DIFGVPSDVA LIKYVELSAS VEGIRQRYQT VFEIPFNSIR RCQVVVARYL 600
  601 ASDFPMTSEL VDNPEEGQSR FMIFTKGAPE VILGKCSNYR QGKELKTIDE TYRTECQAAW 660
  661 EMLGNEGRRV IAFAQKSFNA DDSTKFTGQE YNGDLVFLGM AAIMDPPRPE TAAAIEQCKM 720
  721 AGVKVFMITG DHPTTATAIA RQIGLIGSST NLNDVEKPQN SWAVVTGDQL KNYKKSDWNL 780
  781 LLKNHNIVFA RTNTEQKLEI VQEVQRRGET VAVTGGGVDD TPVLAHANVG IAMGQSGSDI 840
  841 AKQTADIVLL DDNFASIVMG IEEGRLLFDN LRLSLAYTFA HLWPEVFPIM MSFMLGLPHG 900
  901 LSPLQILSVD LASEMPPAIS LAYEQPENDI MHTPPRSRTA RLLSKSLLVY AYILAGFGIT 960
  961 IGCIAAYLSV YWYHNIPISD ILFTAEHHWK IGAKNFTTSQ GLTFGEQQQL FIKGQAAAAW1020
 1021 QITLVMSQVF HLYNCTTRRV SVFRHGLTNI VSVFAVIIEI LLLFMFVYTP VFQYIMDIHT1080
 1081 PPAHVWAIAP IVGLYLLAFN EMRKYFIRNF PKNKLVRLIK W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle