YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NAGAB_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQKTVLLLA LVAQVLMLEN GLLRTPPMGW LAWERFRCNI DCVEDPKNCI SERLFMEMAD  60
   61 RLAQDGWRDL GYVYLNIDDC WIGGRDASGR LIPDPKRFPH GIAFLADYAH SLGLKLGIYE 120
  121 DMGKMTCMGY PGTTLDKVEL DAETFAEWKV DMLKLDGCFS SSRERAEGYP KMAAALNATG 180
  181 RPIAFSCSWP AYEGGLPPKV NYTEVSRVCN LWRNYKDIQD SWKSVLSILD WFVRHQDVLQ 240
  241 PVAGPGHWND PDMLLIGNFG LSFDESRAQM ALWTVLAAPL LMSTDLRTIS PQNMDILQNP 300
  301 LMIKINQDPL GIQGRRILKS KSHIEVFKRY LSNQASALVF FSRRTDMPFR FHCSLLELNY 360
  361 PKGRVYEGQN VFTGDIFSGL QTEVNFTVII NPSGVVMWYL YPIKDLGIST MMSHW

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	415	0.97