YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAR1_MOUSE
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	112	0.97
Transmembrane Helix	113	134	0.94
Cytoplasmic	135	143	0.87
Transmembrane Helix	144	165	0.92
Non-Cytoplasmic	166	184	0.87
Transmembrane Helix	185	207	0.83
Cytoplasmic	208	223	0.81
Transmembrane Helix	224	244	0.94
Non-Cytoplasmic	245	275	0.95
Transmembrane Helix	276	299	0.90
Cytoplasmic	300	316	0.92
Transmembrane Helix	317	339	0.93
Non-Cytoplasmic	340	353	0.83
Transmembrane Helix	354	377	0.91
Cytoplasmic	378	430	0.97

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPRRLLIVA LGLSLCGPLL SSRVPMSQPE SERTDATVNP RSFFLRNPSE NTFELVPLGD  60
   61 EEEEEKNESV LLEGRAVYLN ISLPPHTPPP PFISEDASGY LTSPWLTLFM PSVYTIVFIV 120
  121 SLPLNVLAIA VFVLRMKVKK PAVVYMLHLA MADVLFVSVL PFKISYYFSG TDWQFGSGMC 180
  181 RFATAAFYGN MYASIMLMTV ISIDRFLAVV YPIQSLSWRT LGRANFTCVV IWVMAIMGVV 240
  241 PLLLKEQTTR VPGLNITTCH DVLSENLMQG FYSYYFSAFS AIFFLVPLIV STVCYTSIIR 300
  301 CLSSSAVANR SKKSRALFLS AAVFCIFIVC FGPTNVLLIV HYLFLSDSPG TEAAYFAYLL 360
  361 CVCVSSVSCC IDPLIYYYAS SECQRHLYSI LCCKESSDPN SCNSTGQLMP SKMDTCSSHL 420
  421 NNSIYKKLLA