YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13876346, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENQVLLHFL VPLFCGALSQ PIHYSIPEEL AKGSLVGSLA KDLGLSIQEL PARKLRVSAE  60
   61 DYFSVSAESG DLLVSGRIDR EKICGRKSEC ALEFESVTEN PMNIFHVTVA IQDINDNAPH 120
  121 FFGKSIELEI CESALAGAKF PLDSARDADV GSNSLKMYTV SPNPHFSLST KESPDGSKYP 180
  181 ELLLETPLDR EHQSSHHLIL TAMDGGDPPL SSTTQVWIKV TDANDNAPVF SQDTYKVSLR 240
  241 ENIPPGTLVL QVTASDQDES IHGEITYAFL NAPASTNLVF NLNPNTGAIT TNGTLDFEEK 300
  301 NRYTLGVEAK DGGVHTAHCN VQIEILDDND NAPEVTFMSF SNQVPEDSVL GTVIALIKVR 360
  361 DKDSGQNGLV ACHIQEELPF KLQPTSKNYY KLVIDKALNR EQTPEYNVTI TATDSGKPSL 420
  421 SSKTCVTVHI TDINDNAPVF HQASYLVHVA ENNPPGASIA QVSASDPDLG SNGLISYSII 480
  481 ASDLEPRALS SFVSVNQDSG VVFAQRAFDH EQLRSFQLTL QARDHGSPTL SANVSMRVLV 540
  541 GDRNDNAPRV LYPTLEPDGS ALFDMVPRAA EPGYLVTKVV AVDADSGHNA WLSYHVLQAS 600
  601 DPGLFSLGLR TGEVRTARAL GDRDSARQRL LVAVRDGGQP PLSATATLHL IFADSLQEVL 660
  661 PDLSDDPLPS DPQSELQFYL VVALALISVL FLLAVILAIA LRLRHSSRSA AWGCFQPGLS 720
  721 LKSQPVVPPN YNEGTLPYSY NLCVASHSTT MAGFNFHHVA PEVAPPQDLL CDDPSVVVCG 780
  781 NNEDPQVSDD SAFQQAPPNT DWRFSQAQRP GTSGSQNGDE TGTWPNNQFD TEMLQAMILA 840
  841 SASEAADGSS TLGGGAGTMG LSARYGPQFT LQHVPDYRQN VYIPGSNATL TNAAGKRDGK 900
  901 APAGGNGNKK KSGKKEKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle