YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: COCH_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSRIPALC LGAWLLLLLL PRFARAEGAV PIPVTCFTRG LDIRKEKADV LCPGGCSLEE  60
   61 FSVFGNIVYA SVSSICGAAV HRGVIGTSGG PVRVYSLPGR ENYSSVDANG IQSQMLSRWS 120
  121 ASFAVTKGKS STQEATGRAV STAHPPSGKR LKKTPEKKTG NKDCKADIAF LIDGSFNIGQ 180
  181 RRFNLQKNFV GKVALMLGIG TEGPHVGLVQ ASEHPKIEFY LKNFTSAKDV LFAIKEVGFR 240
  241 GGNSNTGKAL KHTAQKFFTA DTGVRKGIPK VVVVFIDGWP SDDIEEAGIV AREFGVNVFI 300
  301 VSVAKPIPEE LGMVQDVAFV DKAVCRNNGF FSYHMPNWFG TTKYVKPLVQ KLCTHEQMMC 360
  361 SKTCYNSVNI AFLIDGSSSV GDSNFRLMLE FVSNIAKTFE ISDIGAKIAA VQFTYDQRTE 420
  421 FSFTDYNTKE NVLAVLANIR YMSGGTATGD AIAFTVRNVF GPIRDSPNKN FLVIVTDGQS 480
  481 YDDVRGPAAA AHDAGITIFS VGVAWAPLDD LRDMASKPKE SHAFFTREFT GLEPIVSDVI 540
  541 RGICRDFLES QQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle