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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26665873, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSWYSMLCP TYKQRNEDFR KLFSKLPEAE RLIVDYSCAL QREILLQGRL YLSENWICFY  60
   61 SNIFRWETTI SIQLKEVTCL KKEKTAKLIP NAIQICTESE KHFFTSFGAR DRCFLLIFRL 120
  121 WQNALLEKTL SPRELWHLVH QCYGSELGLT SEDEDYVCPL QLNGLGSPKE VGDMIALSDI 180
  181 SPSGAADHSQ EPSPVGSRRG RVTPNLSRAS SDADHGAEED KEEQTDSQLD ASSSQTVTPV 240
  241 AEPLSSEPTP PDGPTSSLGP LDLLSREELL TDTSNSSSST GEEGDLAALL PDLSGRLLIN 300
  301 SVFHMGAERL QQMLFSDSPF LQGFLQQRKF TDVTLSPWSS DSKCHQRRVL TYTIPISNQL 360
  361 GPKSASVVET QTLFRRGPQA GGCVVDSEVL TQGIPYQDYF YTAHRYCILG LARNKARLRV 420
  421 SSEIRYRKQP WSLVKSLIEK NSWSGIEDYF HHLDRELAKA EKLSLEEGGK DTRGLLSGLR 480
  481 RRKRPLSWRG HRDGPQHPDP DPCTQTSMHT SGSLSSRFSE PSVDQGPGAG IPSALVLISI 540
  541 VLIVLIALNA LLFYRLWSLE RTAHTFESWH SLALAKGKFP QTATEWAEIL ALQKHFHSVE 600
  601 VHKWRQILRA SVELLDEMKF SLEKLHQGIT VPDPPLDTQP QPDDSFP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle