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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111378397, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAGRLWSSL LLLLPLFCSK SSSCGLSTHV EIGHRALEFL RLQDGRINYK ELILEHQDAY  60
   61 QAGTVFPDAF YPSICKRGKY HDVSERTHWT PFLNASIHYI RENYPLPWEK DTEKLVAFLF 120
  121 GITSHMVADV SWHSLGIEQG FLRTMGAIDF YNSYSDAHSA GDFGGDVLSQ FEFNFNYLSR 180
  181 RWYVPVRDLL RIYDNLYGRK VITKDVLVDC TYLQFLEMHG EMFAVSKLYS TYSTKSPFLV 240
  241 EQFQDYFLGG LDDMAFWSTN IYRLTSFMLE NGTSDCNLPE NPLFISCDGR NHTLSGSKVQ 300
  301 KNDFHRNLTM FISRDIRKNL NYTERGVFYS TGSWAPESVT FMYQTLERNL RLMLAGSSQK 360
  361 NLNHVSSPSA SYTLSVPYAR LGWVMTSADL NQDGHGDLVV GAPGYSHPGR FQIGRVYIIY 420
  421 GNDLGLPPID LDLDKEAHGI LEGFQPSGRF GSALAVLDFN QDGLPDLAVG APSVGSGQLT 480
  481 YNGSVYVYYG SQQGRLSSSP NVTISCKDTY CNLGWTLLAT DADGDGRHDL VISSPFAPGG 540
  541 GKQRGIVATF YSHPRRNDKE LLTLEEADWK VNGEEDFSWF GYSLHGVTVA NRSLLLIGSP 600
  601 TWKNVSRMAR SSHKKNQEEK SLGKVYGYFL PNRQSTITIS GDKAMGKLGT SLSSGYVRVN 660
  661 GTLTQVLLVG APTHDDVSKM AFLTMTLHQG GATRMYELAP EKTQPALLST FSGDRRFSRF 720
  721 GSVLHLTDLD DDGLDEIIMA APLRITDVTS GLLGGEDGRV YIYNGMYTTL GDMTGKCKSW 780
  781 MTPCPEEKAQ YVLTSPEASS RFGSSLVSVR SKGRNQVVVA AGRSSWGARL SGALHVYSFS 840
  841 SD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle