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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|154800491, gi...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPECTSLQF VSPCAFEAMQ KVDVVRLASL SDPELRLLLP CLVRMALCAP ADQSQSWAQD  60
   61 KKLILRLLSG VEAVNSIVAL LSVDFHALEQ DASKEQQLRH KLGGGSGESI LVSQLQHGLT 120
  121 LEFEHSDSPR RLRLVLSELL AIMNKVSECS GEFFFKSSEL FESAVYLEEA ADVLCILQAE 180
  181 LPSLLPIVDV AEALLHVRNG AWFLCLLVAN VPDSFNEVCR GLIKNGERQD EESLGGRRRT 240
  241 DALRFLCRMN PSQALKVRGM VVEECHLPGL GVALTLDHTK TEACEDGVSD LVCFVSGLLL 300
  301 GTNAKVRTWF GTFIRNGQQR RRENSGSVLW QMRRQLLLEL MGILPTVRST RIVEEADVEM 360
  361 EPTVSVYSGL KEEHVVKASA LLRLYCALMG IAGLKPTEEE AEQLLQLMTS RPPATPAGVR 420
  421 FVSLSFCMLL AFSTLVSTPE QEQLMVVWLS WMIKEEAYFE STSGVSASFG EMLLLVAMYF 480
  481 HSNQLSAIID LVCSTLGMKI VIKPSSLSRM KTIFTQEIFT EQVVTAHAVR VPVTSNLSAN 540
  541 ITGFLPIHCI YQLLRSRSFT KHKVSIKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle