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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PROM1_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVFSALLL LGLCGKISSE GQPAFHNTPG AMNYELPTTK YETQDTFNAG IVGPLYKMVH  60
   61 IFLSVVQPND FPLDLIKKLI QNKKFDISVD SKEPEIIVLA LKIALYEIGV LICAILGLLF 120
  121 IILMPLVGCF FCMCRCCNKC GGEMHQRQKQ NAPCRRKCLG LSLLVICLLM SLGIIYGFVA 180
  181 NQQTRTRIKG TQKLAKSNFR DFQTLLTETP KQIDYVVEQY TNTKNKAFSD LDGIGSVLGG 240
  241 RIKDQLKPKV TPVLEEIKAM ATAIKQTKDA LQNMSSSLKS LQDAATQLNT NLSSVRNSIE 300
  301 NSLSSSDCTS DPASKICDSI RPSLSSLGSS LNSSQLPSVD RELNTVTEVD KTDLESLVKR 360
  361 GYTTIDEIPN TIQNQTVDVI KDVKNTLDSI SSNIKDMSQS IPIEDMLLQV SHYLNNSNRY 420
  421 LNQELPKLEE YDSYWWLGGL IVCFLLTLIV TFFFLGLLCG VFGYDKHATP TRRGCVSNTG 480
  481 GIFLMAGVGF GFLFCWILMI LVVLTFVVGA NVEKLLCEPY ENKKLLQVLD TPYLLKEQWQ 540
  541 FYLSGMLFNN PDINMTFEQV YRDCKRGRGI YAAFQLENVV NVSDHFNIDQ ISENINTELE 600
  601 NLNVNIDSIE LLDNTGRKSL EDFAHSGIDT IDYSTYLKET EKSPTEVNLL TFASTLEAKA 660
  661 NQLPEGKPKQ AFLLDVQNIR AIHQHLLPPV QQSLNTLRQS VWTLQQTSNK LPEKVKKILA 720
  721 SLDSVQHFLT NNVSLIVIGE TKKFGKTILG YFEHYLHWVF YAITEKMTSC KPMATAMDSA 780
  781 VNGILCGYVA DPLNLFWFGI GKATVLLLPA VIIAIKLAKY YRRMDSEDVY DDVETVPMKN 840
  841 LEIGSNGYHK DHLYGVHNPV MTSPSRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle