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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OSMR_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.64
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSVVLHPA FLLAVLSLRA SRSEVLEEPL PLTPEIHKVS FQLKLQEVNL EWTVPALTHE  60
   61 ELNMIFQIEI SRLNISNTIW VENYSTTVKR EEAVRWNWTS DIPLECVKHF IRIRALVDDT 120
  121 KSLPQSSWGN WSSWKEVNAK VSVEPDKSLI FPKDKVLEEG SNVTICLMYG QNVYNVSCKL 180
  181 QDEPIHGEQL DSHVSLLKLN NVVFLSDTGT NINCQATKGP KRIFGTVLFV SKVLEEPKNV 240
  241 SCETRDFKTL DCSWEPGVDT TLTWRKQRFQ NYTLCESFSK RCEVSNYRNS YTWQITEGSQ 300
  301 EMYNFTLTAE NQLRKRSVNI NFNLTHRVHP KAPQDVTLKI IGATKANMTW KVHSHGNNYT 360
  361 LLCQVKLQYG EVIHEHNVSV HMSANYLFSD LDPDTKYKAF VRCASANHFW KWSDWTQKEF 420
  421 STPETAPSQA LDVWRQVWSE NGRRIVTLFW KPLLKSQANG KIISYNIVVE NEAKPTESEH 480
  481 YCVWAPALST NLSLDLQPYK IRITTNNSMG ASPESLMVLS NDSGHEEVKE KTIKGIKDAF 540
  541 NISWEPVSGD TMGYVVDWCA HSQDQRCDLQ WKNLGPNTTS TTITSDDFKP GVRYNFRIFE 600
  601 RSVEHKARLV EKQRGYTQEL APLVNPKVEI PYSTPNSFVL RWPDYDSDFQ AGFIKGYLVY 660
  661 VKSKEMQCNQ PWERTLLPDN SVLCKYDING SETKTLTVEN LQPESLYEFF VTPYTSAGPG 720
  721 PNETFTKVTT PDARSHMLLQ IILPMTLCVL LSIIVCYWKS QWVKEKCYPD IPNPYKSSIL 780
  781 SLIKSKKNPH LIMNVKDCIP DVLEVINKAE GSKTQCVGSG KLHIEDVPTK PPIVPTEKDS 840
  841 SGPVPCIFFE NFTYDQSAFD SGSHGLIPGP LKDTAHQLGL LAPPNKFQNV LKNDYMKPLV 900
  901 ESPTEETSLI YVSQLASPMC GDKDTLATEP PVPVHGSEYK RQMVVPGSLA SPSLKEDNSL 960
  961 TSTVLLGQGE Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle