YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IGHG3_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTAPSVYPL VPGCSDTSGS SVTLGCLVKG YFPEPVTVKW NYGALSSGVR TVSSVLQSGF  60
   61 YSLSSLVTVP SSTWPSQTVI CNVAHPASKT ELIKRIEPRI PKPSTPPGSS CPPGNILGGP 120
  121 SVFIFPPKPK DALMISLTPK VTCVVVDVSE DDPDVHVSWF VDNKEVHTAW TQPREAQYNS 180
  181 TFRVVSALPI QHQDWMRGKE FKCKVNNKAL PAPIERTISK PKGRAQTPQV YTIPPPREQM 240
  241 SKKKVSLTCL VTNFFSEAIS VEWERNGELE QDYKNTPPIL DSDGTYFLYS KLTVDTDSWL 300
  301 QGEIFTCSVV HEALHNHHTQ KNLSRSPELE LNETCAEAQD GELDGLWTTI TIFISLFLLS 360
  361 VCYSASVTLF KVKWIFSSVV QVKQTAIPDY RNMIGQGA

Type	Start	End	Confidence
Non-Cytoplasmic	1	346	0.87
Transmembrane Helix	347	370	0.66
Cytoplasmic	371	398	0.62