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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6679891, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAIAAVAAR RRRSWLSLVL AYLGVCLGIT LAVDRSNFKT CDESSFCKRQ RSIRPGLSPY  60
   61 RALLDTLQLG PDALTVHLIH EVTKVLLVLE LQGLQKNMTR IRIDELEPRR PRYRVPDVLV 120
  121 ADPPTARLSV SGRDDNSVEL TVAEGPYKII LTAQPFRLDL LEDRSLLLSV NARGLMAFEH 180
  181 QRAPRVPFSD KVSLALGSVW DKIKNLFSRQ ESKDPAEGNG AQPEATPGDG DKPEETQEKA 240
  241 EKDEPGAWEE TFKTHSDSKP YGPTSVGLDF SLPGMEHVYG IPEHADSLRL KVTEGGEPYR 300
  301 LYNLDVFQYE LNNPMALYGS VPVLLAHSFH RDLGIFWLNA AETWVDISSN TAGKTLFGKM 360
  361 LDYLQGSGET PQTDIRWMSE SGIIDVFLML GPSVFDVFRQ YASLTGTQAL PPLFSLGYHQ 420
  421 SRWNYRDEAD VLEVDQGFDD HNMPCDVIWL DIEHADGKRY FTWDPTRFPQ PLNMLEHLAS 480
  481 KRRKLVAIVD PHIKVDSGYR VHEELRNHGL YVKTRDGSDY EGWCWPGSAS YPDFTNPRMR 540
  541 AWWSNMFSFD NYEGSAPNLY VWNDMNEPSV FNGPEVTMLK DAVHYGGWEH RDIHNIYGLY 600
  601 VHMATADGLI QRSGGIERPF VLSRAFFSGS QRFGAVWTGD NTAEWDHLKI SIPMCLSLAL 660
  661 VGLSFCGADV GGFFKNPEPE LLVRWYQMGA YQPFFRAHAH LDTGRREPWL LASQYQDAIR 720
  721 DALFQRYSLL PFWYTLFYQA HKEGFPVMRP LWVQYPEDMS TFSIEDQFML GDALLIHPVS 780
  781 DAGAHGVQVY LPGQEEVWYD IQSYQKHHGP QTLYLPVTLS SIPVFQRGGT IVPRWMRVRR 840
  841 SSDCMKDDPI TLFVALSPQG TAQGELFLDD GHTFNYQTRH EFLLRRFSFS GSTLVSSSAD 900
  901 PKGHLETPIW IERVVIMGAG KPAAVVLQTK GSPESRLSFQ HDPETSVLIL RKPGVSVASD 960
  961 WSIHLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle