YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DRD5_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPPGRNGTA HRARLGLQRQ LAQVDAPGGS AAPLGPAQVV TAGLLTLLIV WTLLGNVLVC  60
   61 AAIVRSRHLR AKMTNIFIVS LAVSDLFVAL LVMPWKAVAE VAGYWPFGAF CDIWVAFDIM 120
  121 CSTASILNLC IISVDRYWAI SRPFRYERKM TQRVALVMVA LAWTLSILIS FIPVQLNWHR 180
  181 DKAGSQGREG LLSNETPWEE GWELDGRTEN CDSSLNRTYA ISSSLISFYI PVAIMIVTYT 240
  241 RIYRIAQVQI RRISSLERAA EHAQSCRSRG ACEPDPSLRA SIKKETKVFK TLSVIMGVFV 300
  301 CCWLPFFILN CMVPFCSSGD AQGPRTGFPC VSETTFDIFV WFGWANSSLN PIIYAFNADF 360
  361 RKVFAQLLGC SHLCFRTPVQ TVNISNELIS YNQDTVFHRE IAAAYVHMIP NAVSSGDREV 420
  421 GEEEEAEEEG PFDHMSQISP TTPDGDLAAE SVWELDCEEE VSLGKISPLT PNCFHKTA

Type	Start	End	Confidence
Non-Cytoplasmic	1	38	0.72
Transmembrane Helix	39	64	0.83
Cytoplasmic	65	73	0.88
Transmembrane Helix	74	95	0.91
Non-Cytoplasmic	96	112	0.86
Transmembrane Helix	113	134	0.92
Cytoplasmic	135	153	0.88
Transmembrane Helix	154	174	0.94
Non-Cytoplasmic	175	224	0.93
Transmembrane Helix	225	243	0.95
Cytoplasmic	244	287	0.98
Transmembrane Helix	288	309	0.91
Non-Cytoplasmic	310	337	0.88
Transmembrane Helix	338	358	0.52
Cytoplasmic	359	478	0.60