YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DRD3_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLSQISSH INSTCGAENS TGVNRARPHA YYALSYCALI LAIIFGNGLV CAAVLRERAL  60
   61 QTTTNYLVVS LAVADLLVAT LVMPWVVYLE VTGGVWNFSR ICCDVFVTLD VMMCTASILN 120
  121 LCAISIDRYT AVVMPVHYQH GTGQSSCRRV ALMITAVWVL AFAVSCPLLF GFNTTGDPSI 180
  181 CSISNPDFVI YSSVVSFYVP FGVTVLVYAR IYMVLRQRRR KRILTRQNSQ CISIRPGFPQ 240
  241 QSSCLRLHPI RQFSIRARFL SDATGQMEHI EDKPYPQKCQ DPLLSHLQPL SPGQTHGELK 300
  301 RYYSICQDTA LRHPNFEGGG GMSQVERTRN SLSPTMAPKL SLEVRKLSNG RLSTSLKLGP 360
  361 LQPRGVPLRE KKATQMVVIV LGAFIVCWLP FFLTHVLNTH CQACHVSPEL YRATTWLGYV 420
  421 NSALNPVIYT TFNIEFRKAF LKILSC

Type	Start	End	Confidence
Non-Cytoplasmic	1	31	0.91
Transmembrane Helix	32	55	0.90
Cytoplasmic	56	65	0.81
Transmembrane Helix	66	88	0.92
Non-Cytoplasmic	89	105	0.83
Transmembrane Helix	106	126	0.81
Cytoplasmic	127	149	0.86
Transmembrane Helix	150	172	0.91
Non-Cytoplasmic	173	189	0.92
Transmembrane Helix	190	212	0.91
Cytoplasmic	213	373	0.99
Transmembrane Helix	374	394	0.91
Non-Cytoplasmic	395	414	0.86
Transmembrane Helix	415	433	0.66
Cytoplasmic	434	446	0.64