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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12698041
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFLFPWFSFV LLSVASLLPF SCLFCRCVGL GYAAGQISHQ SSNMPAESGK RFKPSKYVPV  60
   61 SAAAIFLVGA TTLFFAFTCP GLSLYVSPAV PIYNAIMFLF VLANFSMATF MDPGIFPRAE 120
  121 EDEDKEDDFR APLYKTVEIK GIQVRMKWCA TCRFYRPPRC SHCSVCDNCV EEFDHHCPWV 180
  181 NNCIGRRNYR YFFLFLLSLT AHIMGVFGFG LLYVLYHIEE LSGVRTAVTM AVMCVAGLFF 240
  241 IPVAGLTGFH VVLVARGRTT NEQVTGKFRG GVNPFTNGCC NNVSRVLCSS PAPRYLGRPK 300
  301 KEKTIVIRPP FLRPEVSDGQ ITVKIMDNGI QGELRRTKSK GSLEITESQS ADAEPPPPPK 360
  361 PDLSRYTGLR THLGLATNED SSLLAKDSPP TPTMYKYRPG YSSSSTSAAM PHSSSAKLSR 420
  421 GDSLKEPTSI AESSRHPSYR SEPSLEPESF RSPTFGKSFH FDPLSSGSRS SSLKSAQGTG 480
  481 FELGQLQSIR SEGTTSTSYK SLANQTRNGS LSYDSLLTPS DSPDFESVQA GPEPDPPLGY 540
  541 TSPFLSARLA QQREAERHPR LVPTGPTHRE PSPVRYDNLS RHIVASLQER EKLLRQSPPL 600
  601 PGREEEPGLG DSGIQSTPGS GHAPRTSSSS DDSKRSPLGK TPLGRPAVPR FGKPDGLRGR 660
  661 GVGSPEPGPT APYLGRSMSY SSQKAQPGVS ETEEVALQPL LTPKDEVQLK TTYSKSNGQP 720
  721 KSLGSASPGP GQPPLSSPTR GGVKKVSGVG GTTYEISV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle