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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55664712, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGTKDLTSQ QKESNVKTFC SKNILAILGF SSIIAVIALL AVGLTQNKAL PENVKYGIVL  60
   61 DAGSSHTSLY IYKWPAEKEN DTGVVHQVEE CRVKGPGISK FVQKVNEIGI YLTDCMERAR 120
  121 EVIPRSQHQE TPVYLGATAG MRLLRMESEE LADRVLDVVE RSLSNYPFDF QGARIITGQE 180
  181 EGAYGWITIN YLLGKFSQKT RWFSIVPYET NNQETFGALD LGGASTQVTF VPQNQTIESP 240
  241 DNALQFRLYG KDYNVYTHSF LCYGKDQALW QKLAKDIQVA SNEILRDPCF HPGYKKVVNV 300
  301 SDLYKTPCTK RFEMTLPFQQ FEIQGIGNYQ QCHQSILELF NTSYCPYSQC AFNGIFLPPL 360
  361 QGDFGAFSAF YFVMKFLNLT SEKVSQEKVT EMMKKFCAQP WEEIKTSYAG VKEKYLSEYC 420
  421 FSGTYILSLL LQGYHFTADS WEHIHFIGKI QGSDAGWTLG YMLNLTNMIP AEQPLSTPLS 480
  481 HSTYVFLMVL FSLVLFTVAI IGLLIFHKPS YFWKDMV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle