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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117558615, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRGVKPFA SAVGLLLGLL YAVEAAKVNK HKPWIETTYH GIVTENDDKV LLDPPLIALD  60
   61 KDAPLRYAGE ICGFRIHGQD VPFEAVVLDK STGEGVIRAK DKLDCELQKE HTFTIQAYDC 120
  121 GEGPDGGNMK KSHKATVHIQ VNDVNEYSPV FKEKSYKATV IEGKKYDSIM KVEAVDADCS 180
  181 FQFSQICSYE IVTPDVPFTI DKDGNIKNTE KLNYGKERMY KLTVTAYDCG KNRASEDVLV 240
  241 KINIKPTCKP SWQGFNKRIE YEPGTGSLAL FPSMHLETCE EPITSIQASI MLETNHIGKG 300
  301 CDRDTYSEKS LHKLCGASSG TVELLPAPSN SANWTVGLPT DNGHDSDQVF EFNGTQAIKV 360
  361 PEGVVSTTLK EPFTISVRMR HGPGGREKET ILCNSDKTEM NRHHYSLYVH NCRLVLLLRQ 420
  421 EPTESESYKP AEFHWKLDQV CDKEWHHYVL NIEFPAVTLF VDGGTFEPFL VTEDYPLHTS 480
  481 KIETQLTIGA CWQGGSARMT QFFRGNLAGL MIRSGKLENK KVIDCLYTCK EGLDVQLPEE 540
  541 VASAVKVEFN PNQSSLSLEG DDIESFEKVM QHISYLNSRQ FPTPGIRHLR VSTTVKCFNE 600
  601 ETCISVPDSE GYVMVLQPEE PKISLSGIDH FARGAAEFES VEGVTLFPEP RIVSTITREV 660
  661 EVEAEAETEA EGEDDPTVQE TVVSEEIMHN LDTCEVTVVG EDLNGDHESL EVDLAQIQQR 720
  721 ALEMSSSNVG MVITGVNTMA NYEQVLHLIR YRNWHTEALF DRKFKLVCSE LNGRYISNEF 780
  781 KVEVNVIHTA NPMDHANNAM VQPQFISQVQ HASVDLSGHN LVNTHQASVV PSAATIVIVV 840
  841 CVSFLVFMII LGVFRIRAAH QRTMRDQENG KENEMDWDDS ALTITVNPME TYEDQHSSEE 900
  901 EGDEEEEESE DGEEEDDITS AESDSSEDEA GEQEDQQGSS RQQQLEWDDS TLTY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle