YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169158136, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTSSSYTGR LFLIHLYFTV IYAIPAPVNF TIWSHNFRHI LHWNYGVNSP PQSVFNLQRF  60
   61 EKGKQTEHLN IRNTTMDVSE ACQDIYIPCT FLIWASLDNM NSSVIEKKFI PYEDTIIGPP 120
  121 VIFLSGCGDC LNISISLPNE SRKDDKLRRF YNSVSYSISW KKHGNNEVRE ILRSQEPSKQ 180
  181 YVLENLQPGV QYCVKVLPQI NSNQNTQPSS WQCEYTSKEE AQRVLYFMSW LLGATLSGSC 240
  241 VMMLAWILVY TGFLCKPKNP PLKSLSNIVP ATYLIPEQTL SESLSLTEVQ LIHLSYDTTE 300
  301 NNSQLKNPEK REYEGSVLKS DTEDEEDSND EDEVKCVYMS CEIDDISCQN NSTKKDIVSA 360
  361 LPFNKSSIVC YTKEPAMEKI QYDDLKSEKE LLSELFEEGH GHLEVTNTQL KTEGNEKGST 420
  421 NTPGNINLFS VTVRTFGAED DLDKEDVYKP LLPKLFVKTD KWTEELLPVS NKIQISIPIE 480
  481 TGMKTDDLIH LDSQNDLVHV CSLAHNVETN PDTTMSAYMM NHIGKMHDQN KDLLEETNCD 540
  541 TSYITR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle