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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24308247, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSWYSMLSP TYKQRNEDFR KLFSKLPEAE RLIVDYSCAL QREILLQGRL YLSENWICFY  60
   61 SNIFRWETTI SIQLKEVTCL KKEKTAKLIP NAIQICTESE KHFFTSFGAR DRCFLLIFRL 120
  121 WQNALLEKTL SPRELWHLVH QCYGSELGLT SEDEDYVSPL QLNGLGTPKE VGDVIALSDI 180
  181 TSSGAADRSQ EPSPVGSRRG HVTPNLSRAS SDADHGAEED KEEQVDSQPD ASSSQTVTPV 240
  241 AEPPSTEPTQ PDGPTTLGPL DLLPSEELLT DTSNSSSSTG EEADLAALLP DLSGRLLINS 300
  301 VFHVGAERLQ QMLFSDSPFL QGFLQQCKFT DVTLSPWSGD SKCHQRRVLT YTIPISNPLG 360
  361 PKSASVVETQ TLFRRGPQAG GCVVDSEVLT QGIPYQDYFY TAHRYCILGL ARNKARLRVS 420
  421 SEIRYRKQPW SLVKSLIEKN SWSGIEDYFH HLERELAKAE KLSLEEGGKD ARGLLSGLRR 480
  481 RKRPLSWRAH GDGPQHPDPD PCARAGIHTS GSLSSRFSEP SVDQGPGAGI PSALVLISIV 540
  541 ICVSLIILIA LNVLLFYRLW SLERTAHTFE SWHSLALAKG KFPQTATEWA EILALQKQFH 600
  601 SVEVHKWRQI LRASVELLDE MKFSLEKLHQ GITVSDPPFD TQPRPDDSFS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle