YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|121582342, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRKKGSLIL CGAFLFVAWN ALLLLFLWGR PPIGRLGEGG GAEPGAGEEW GAGKSKVGGA  60
   61 NGLAGEVIRL AEEVESELET QKKLLKQIQS HRELWEQRKE LEKRESEDTK DEKIDVEPKK 120
  121 PRQIPAVHLS HKVVEDAQTV TKKMQTLMVT PPQLVMKEQE TDQKNKQMME DQLGLTTPSP 180
  181 QIIIPILVIA CDRVTVKRSL DRLIQYRPSA ELYPIIVSQD CGHADTARVI GSYGSQITHI 240
  241 SQPDLADIPV RPDHRKFQGY YKIARHYRWA LNQVFNVFAY STVVIVEDDL EVAPDFFEYF 300
  301 RALYPILRSD PTLWCISAWN DNGRDGLVDP GKAELLYRTD FFPGLGWMLL KEVWAELEPK 360
  361 WPKAFWDDWM RHPEQRKNRS CIRPEISRTI TFGRKGVSLG QFFDQYLRYI KLNTEFVPFT 420
  421 KHDLSYLVRE KYDVSFEKDV YSAPLVKVEE LQHGGSLKGS GPFRVQYSSR DSFKVLARNL 480
  481 GVMDDLKSGV PRAGYRGVVS FISRGRRIYL APPEGWTKYD VSWS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle