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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116310768
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGAWRKAWL SMLDRGGGSG AGGGGGGSSG SLHVHLHGLL SPSSSSSSLN GYKRGGGKHG  60
   61 GGGGCGGGHV MTSSKAVLAC FSVALVVAFF YVSVASGPTA DAASFPSPTG ASSSSLLSWL 120
  121 SSNSTSAAAL PRRSLPPHPP IPPAGGGADL RNTARRTQSG AEGSGLPAPA AEQTAKPRVS 180
  181 DLRSGAGNAT VGDVDGDQRV GNGTRSRQQR EETATPMPRW QRRDEEKNST HHAIVAAPGN 240
  241 STDAPAPPLN STATPRAAAA AAATPSTPPE RKADTHHSHR RGIRHKQQHH HQHPRRRKDT 300
  301 VLLAAAAARQ EAPDRRDDGA AMPLPAATII NTSTVGDNRV VWTSGVQSGL VSFAKCDVFS 360
  361 GRWVRDDDEG GGAYPFYPPG SCPHIDDDFN CHKNGRADTG FLRWRWQPHG CDIPRLNPID 420
  421 FLERLRGQRI IFVGDSLNRN MWESLVCILR HGVRDKRRMY EASGRNQFKT RGYYSFRFRD 480
  481 YNCSVDFIRS IFLVKEMINE TKGGAVVDAK LRLDELDETT PAYRTADIVV FNTGHWWTHW 540
  541 KTSRGLNYYQ EGNYVHPSLE VMDAYKRALT TWARWVDKNI DSTRTQVVFR GYSLTHFRGG 600
  601 QWNSGGRCHR ETEPIFNRTH LAEYPEKMRI LEQVLGRMRT PVIYLNISAM TDYRKDAHPS 660
  661 VYRVRYETEE ERMAAVAKQD CSHWCLPGVP DSWNELLYAS LLQAGRGSWR L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle