YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|118786786, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAPTKEPVSQ SVSYFKLFRF ATWGEVCATL MGVLLASMAS LGLPYGVILY GEFTTLLVDR  60
   61 TIGIGKSTDT AILSIFGGGR VLVNATEQEN AAAIMEDAKA FGLGVVAVTI LQFIFATLSV 120
  121 DVINRSAQKQ ISRIRQLFLK AVLRQDMTWY DLNSDDSFAV RITDDLDKLK EGIGEKLSIF 180
  181 TYLVMSFVIS VIFSFFYGWK LTLVILSCAP IIILATAFVA KMQSTLTEKE LKSYSSAGAV 240
  241 AEEVLGSIRT VVAFGGEKKE ADRYRERLAG AELNGRRKGL FSGIGGGIMW FIIYCCYALA 300
  301 FWYGISLILE DRDKDLKDYT PAVLIIVLFG VLAGAQNLGL SSPHLEAFST AKGSAATIFS 360
  361 VIDRIPVIDS LGDAGLRPGS MQGNIKFSNV FFRYPARNDV QVLQGLNLEI KTGQTVALVG 420
  421 PSGCGKSTCL QLIQRLYDPL SGSVTIDGTK VSELNIGWLR SFIGLVGQEP VLFATTIAEN 480
  481 IRYGNPDASQ SEIERAAKIA NCHSFITKLP NGYATMIGER GAQLSGGQKQ RIAIARALVR 540
  541 NPKILLLDEA TSALDPNSEK RVQDALERAS KGRTTLVVSH RLSTITNADK IVYIDKGLVM 600
  601 EQGTHEELMA ARGLYYDLVV ASGSQKTVDD DESVPMAPSA LSMRQESVDD GAEASDDESD 660
  661 SGKSDEKNEE EQEEVYHVSL MRLLKLNAPE WHYILFGCAA AIVVGASFPA FAVLFGEMYG 720
  721 ILSVADPEYV KEESNFYSFL FLVLGLITGV GTFFQTYLFN IAGVRLTSRL RQKSFKAIVS 780
  781 QDMAWFDESR NAVGALCARL SGDCASVQGA TGTRIGSLLQ AASTICIGVG ISFFYSWNLT 840
  841 LVSIIAIPVT LASITLESRY SQTSSLKEKQ SQEGATKLAV EAISNIRTVA SLGQEKHVLQ 900
  901 RYGEETVKID DACRRKTRLR GTVFALGQVM PFAGYGLALF YGGKLVSEKE LEYKDVIKVS 960
  961 EALIFGAWML GQALAYAPNV NSAILSAGRL MKLLDRTPRM HNPSTSYHSL SQVGSNAKFS1020
 1021 LFRTEGDIKF TDVEFRYPTR PTVPVLQGLN LDIGKGQTVA LVGPSGCGKS TCIQLLLRYY1080
 1081 DPDSGKVDID GTTTTEFSLN RIRAQMGLVS QEPILFDRTI AENIAYGDNT REIAMPEIME1140
 1141 AAKMANIHEF IVNLPKGYDT SLGSKGAQLS GGQKQRIAIA RALVRNPRVL LLDEATSALD1200
 1201 NQSEKIVQNA LDHARTGRTC IIIAHRLTTI QNANLICVIQ NGVVVEAGTH DELMAKSRIY1260
 1261 AKLYQMQQVA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle