YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116062065
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLLGFICL IVPLLSLETD KCTEYPNEVI SFSSVNEIDI RSCPLTPNEM HGGTIIWYKN  60
   61 DSKTPISADK DSRIHQQNEH LWFVPAKMED SGYYYCIMRN STYCLKTKIT MSVLENDPGL 120
  121 CYNTQASFIQ RLHVAGDGSL VCPYLDFFKD ENNELPKVQW YKNCKPLPLD DGNFFGFKNK 180
  181 LMVMNVAEEH RGNYTCRTSY TYQGKQYPVT RVITFITIDD SKRDRPVIMS PRNETMEADP 240
  241 GSTIQLICNV TGQFTDLVYW KWNGSEIEWD DPILAEDYQF LEHPSAKRKY TLITTLNVSE 300
  301 VKSQFYRYPF ICFVKNTHIL ETAHVRLVYP VPDFKNYLIG GFAIFTATAV FCACIYKVFK 360
  361 VDIVLWYRDS CSDFLPPKAS DGKTYDAYVL YPKTYGEGSF AYLDTFVFKL LPEVLEGQFG 420
  421 YKLFICGRDD YVGEDTIEVT NENVKRSRRL IIILVRDMGS FSCLGQSSEE QIAIYDALIR 480
  481 EGIKIILLEL EKIQDYEKMP ESIQFIKQKH GAICWSGDFK ERPQSAKTRF WKNLRYQMPA 540
  541 QRRSPLSKHH LLTLDPVLDT KEKLQAETHL PLG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle