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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-31
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTLSSFFMS SYSFFLSAVL FCCFLKHLLF MFFFSFAVFV WNIMLGASSS EEEDDDFQED  60
   61 HDSLPIAQVK KRSLLSGAMT PRSSSPAPSD SVSQTNSLKR NNSSSQGRRK DSVQSQTPAR 120
  121 SPMRMNAPSP MPQARIMSNV SKPIMQNSQE FDGDEEEGEE GSTTVVGSGD ECGGPALSKE 180
  181 EQERMKAERE EEDHKKNLQM YMFLARCIAY PFNGQQTGDM ARRQMKVNKQ ELARIRERFT 240
  241 LFLKGETNIA ADEAFTKAIQ SYFEVFLKSE RVQKVVHAGG FSQHDFREVF RLNIEKRVRS 300
  301 LPDIEGLSKD TVLNSWLAKF DAIIKGDETD QNRNARGRSR NPQNAMSADA VLGKEQLYDV 360
  361 FQQILGVKKF EHQIIFNALQ LDNPDEQAAA IRREFATREE ALKDPIKMKR LTPKFVVKDM 420
  421 ETLYMDEVRM SINTLIGNLE TVPVTTRGAT VGKRKDKSRS RSIEDLSLFN SLKRRTSSGS 480
  481 LNKGDSEDGD VTLTKSDVSL ALSMEVVVME VQGLKSVQPS KIVYCTMEVD GHKLQTDHAE 540
  541 ASKPKWDTQG DFSTKNPLPV VKVKLYTEVK SMIAFEDKEL GKVIIQPTPN CARSPEWYTM 600
  601 TLPKSSQDQN LKIRIAIRVE KPPNLKYCGY CYCIGRNAWK KWKKRFFCLV QVSQYAFAVC 660
  661 SFRQKKADPT EFIQLDGFTI DYMPESDPEL SAQGGKHFFT AIKEGDELKF ATDDENERHL 720
  721 WVQALYRATG QAYKPVPPKQ STIAPKAQGF QDKASKHGMD AMIQADSINF DHDHFYSDVQ 780
  781 RLTLDFRINE PICSLGWFSP GQAFVLEEYS ARYMVRGCFR HVTLLSNLLD KADDGLLIDP 840
  841 ALIHYSFAFC ASHVHGNRCM PDRQGPEGVG TVTLEEKEKF QEIKERLRVL LEKQITNFRY 900
  901 CFPFGRPEGA LKGTLGLLER VLMKDVVSPV PPEEVRAVIR KCLEDAALVN YTRICNEAKI 960
  961 EQRMGIDVSP AQRIEDMIRV TEFCIDLLKE NEEHHGEAFA WFSDLLSDHS EIFWSLYSVD1020
 1021 LDSALEVQPH DSWDSFPLFQ MLNDFLLSES SLKGGIFHNK IVQQFQPLVV RYIDLMEHSI1080
 1081 AQAIDKGFSK EKWESRKEGC ATSEDIYWKL DALHTFVIDL NWPEEDFRKY LQTKMKSLTS1140
 1141 DMISKVSDCT FTAFDSWMQR AKKSTDYMLP SEVCVQINVM FSSKSRAVRV TVDSGEYKYQ1200
 1201 SKLDETLETM LKTMESCIQE KLHGVLESVL SRLARYDEGN PIGAILNIAP KPASIFNKLK1260
 1261 TMAGDTSAQA TTTARQPLTA QQSSGQIGNS YVTFFHGCTE LLRQVIIDEI WVNGLFEHWY1320
 1321 DNQMKSINEW LTERLQQSLS ATQYISLSTI VKKVYQDFSL QGIDEERLNS KTYQSISRRL1380
 1381 QLEESNSHIQ EGIRKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle