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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE40456
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYEEGETHD GLSKCLFSTI WTPSNPYRHT SSHRRTRVCV AITFGLLMFG LGVSVGAFLH  60
   61 AVMFPDGSPS ILSLPSFLKS DAPMDADNST LINLRIAGAE LGSSVELEDT TVGSEEEEMV 120
  121 EEGDEEEDEV EEKSEESEEE EEKIKKKRRG KKEKKEKVVE EVEEEEEHEE TEEQEEEQSG 180
  181 EKFVKANKEC TNITWYSSRL PRTAEPIDYD LTLHPNLTNG EVEASVSIRI LIKNDTKLLI 240
  241 LNAENLEMKS FDITKKGAKV KADFVKCAVM TQWAWKLAKR LHKGDHIVLT IYYSAQMKSD 300
  301 LQGLYFSTHL GTDGKKTKSA ATQFEPTFAR KMLPCFDEPN FKATFQVAII RNPHHIARSN 360
  361 MNILISKEYK NGLIKDVFEK SVKMSTYLLA VAVLDGYGYI KRLTRNTQKA IEVRLYAPQD 420
  421 MLTGQSEFGL DTTIRALEFF EDYFNISYPL DKIDLLALDD FSEGAMENWG LVTFRDSALL 480
  481 FNERKASVVA KEHIALIICH EIAHQWFGNL VTMDWWNEVF LNEGFANYME YKCVEHLFPD 540
  541 WSIMSRFYAE NLAFSQEPDG FLSSRAIESD DDDSLLNLFD AINYHKAAAI IHMIAEMAGQ 600
  601 KNFQNALVEY LNKYAYSNAI GVDLWKIVEK HANLQGTVSI PDLAKAYTTQ VGYPLLTVER 660
  661 TDEGVLVHNQ TRFLFAEGDK AEEKRGDWKW PIPISYRDSE HRRKKQHWIQ ADDKNVTWET 720
  721 TSNDWLILNT GGVGYFKVLY DPETYRKLVK QLQRNHTTIS PIDRSMILVD SFDLSKTSLL 780
  781 NISVYFDLLE YVEKETDKMT WSIVGKQLRT IEALIEESDY LDIYQDFQRS LIMRLYESLD 840
  841 WDEQGANPNQ KRLQVDIFAV ACRLQIKDCT KQAYQRYLQW VSSGVRNPEH HMIALMEGVK 900
  901 QGETTAWERI WKAYKTATSP SEKNNIIGAL TSTKDASLIN RLLKYCLDGK IKANLIPRVF 960
  961 SYFSLNQSTR NIVWKFFKTH FEQFHGILGK GSLMASCVKC LAEPLSTETE LEEVKEFLKS1020
 1021 QKFAEDGLIK MEMTYEQIEL NIQWRKLNEG QLGKWISRWD ERRRTLYRRK RHRHHHKPLS1080
 1081 VF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle