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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114677073
Protein type: Globular with Signal Peptide
Type Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSSACSLLP SQGPTGTLSH TPVTRQSFFQ ACVAEVDHIP GTTKCPMPAC ELMAAPHLDP  60
   61 CPESCDPTTC FPTIVSQPQS PVPRILLLCR TWLCMPSHMC QPHQPQCTAA TLYRYFQSLI 120
  121 SCLLQEGCCP ALGALVTRVP QCWPEKCQDH CKASTGSWHS CLSTQSLSSP IVLEESQVCI 180
  181 AMGAVCFHTF GGAHYEFLIS CVHCLLPQGP DPLTLWPEDM SPKDLNHNSG PSDPITSLPN 240
  241 ARKVAKLPGC SQVCGPLFPG FCQMAVHALF TRNGQALGVC LLSRVCFRER VSLCLLRAAG 300
  301 SLHVSLSGPP SAPPLPPFPF PFSRFLVVSS PGTPVLLSAG ILHLRLPHPT LAMSPPPLSV 360
  361 SVPDPPTPAA RPSFAVPAAF ALSGALPGHM RGTDLPTQGH YSICAQTYDL GCVLPANPAH 420
  421 SSSRCYESYE RGFTIDGTDC VSQDHCGCFH NECYLLVRGI SRPGRGMDPQ LVAGPSVQSR 480
  481 GCALGGGVRG CNRAVPQAPV LVGPEDAVSL RASLALRGRL QAARGDNNGI AAYHLKLLGG 540
  541 QRGSSLVDCS GCPGLRALTV GKDPNTAAQC PDSHPQRARP TQLLEPHAAS GGLAPTLSLL 600
  601 VFPWPEKPPV RRGSAGWREA GVGGQGKRWA EVAVALPFGL CWLCGGSAVR WAFAERLCLA 660
  661 VVMSRHSRLQ RQVLSLYRDL LRAGRGKPGA EARVRAEFRQ HAGLPRSDVL RIEYLYRRGR 720
  721 RQLQLLRSGH ATAMGAFVRP RAPTEEPGGV GSQPDDGDSP RNPHDSTGAP ETRPDGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle