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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114674911
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHRAHQVGA PSLSPQVLLS HQRLVSRWQL RCTSQQPAVL GSVGGCSRPQ HSDEPLFRRQ  60
   61 LEVGGRWHAG THLLLATRPV GALRLPLLPK LPHQQCQPHS QEQGGQEGED HDDSSDGFRT 120
  121 LQRGDRLPSE LELELVDEGK TVLFSFAEAV CTVEGSQNKS KTEWLGSTPS ANRVDPARQA 180
  181 SSQLPVHPKT PALYQDSVVI RTGENDLTSA SLSAKCERQY HLPYRVLAKT TREGISSEGD 240
  241 ADPDGGLDLE EFSRYLQERE QRLLLMFHSL DRNQDGHIDV SEIQQSFRAL GISISLEQAE 300
  301 KILHSMDRDG TMTIDWQEWR DHFLLHSLEN VEDVLYFWKH STVLDIGECL TVPDEFSKQE 360
  361 KLTGMWWKQL VAGAVAGAVS RTGTAPLDRL KVFMQVHASK TNRLNILGGL RSMVLEGGIR 420
  421 SLWRGNGINV LKIAPESAIK FMAYEQIKRA ILGQQETLHV QERFVAGSLA GATAQTIIYP 480
  481 MEVLKTRLTL RQTGQYKGLL DCARRILERE GPRAFYRGYL PNVLGIIPYA GIDLAVYETL 540
  541 KNWWLQQYSH DSADPGILVL LACGTISSTC GQIASYPLAL VRTRMQAQAS IEGGPQLSML 600
  601 GLLRHILSQE GMRGLYRGIA PNFMKVIPAV SISYVVYENM KQALGVTSRS TDSLYLNTQT 660
  661 LPPSGTRSSV LVKRWILDPQ PQIPMPRALD LQAQLLDSGC QQTSPLDPDN HNAWILGPPS 720
  721 LDPRSPHSTH WIPALVFGFC FFFNLDTGSQ ILLLTARSLH FKHYAFHPQA LDPRFPSLHP 780
  781 PDSGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle