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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114640880
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAANMMQNR PLPALQVPEP QGAPEGSPVW SSSSTPTLRR RRFKMRRMKN VQEQSLEAGL  60
   61 ARDLPAVLAP GKEFLQLPSI EITPSSDEDT PWSNCSTPSA SPRRKRFLLR KWLRVRERKE 120
  121 CSESSSQQSS QQSSHDDDSS RFLSPRAREE STASNSNRST PACSPILRKR SRSPTPQNQD 180
  181 GDTMVEKGSD HSSDKSPSTP EQGVQRSCSS QSGRSGGKNS KKSADWFHVL SPTYKQRNED 240
  241 FRKLFKQLPD TERLIVDYSC ALQRDILLQG RLYLSENWIC FYSNIFRWET LLTVRLKDIC 300
  301 SMTKEKTARL IPNAIQVCTD SEKHFFTSFG ARDRTYMMMF RLWQNALLEK PLCPKELWHF 360
  361 VHQCYGNELG LTSDDEDYVP PDDDFNTMGY CEEIPVEENE VNDSSSKSSI ETKPDASPQL 420
  421 PKKSITNSTL TSTGSSEAPV SFDGLPLEEE ALEGDGSLEK ELAIDNIMRE KIEMIAPVNS 480
  481 PSLDFNDNED IPTELSDSSD THDEGEVQAF YEDLSGRQYV NEVFNFSVDK LYDLLFTNSP 540
  541 FQRDFMEQRR FSDIIFHPWK KEENGNQSRV ILYTITLTNP LAPKTATVRE TQTMYKASQE 600
  601 SECYVIDAEV LTHDVPYHDY FYTINRYTLT RVARNKSRLR VSTELRYRKQ PWGLVKTFIE 660
  661 KNFWSGLEDY FRHLESELAK TESTYLAEMH RQSPKEKASK TTTVRRRKRP HAHLRVPHLE 720
  721 EVMSPVTTPT DEDVGHRIKH VAGSTQTRHI PEDTPNGFHL QSVSKLLLVI SCVLVLLVIL 780
  781 NMMLFYKLWM LEYTTQTLTA WQGLRLQERL PQSQTEWAQL LESQQKYHDT ELQKWREIIK 840
  841 SSVMLLDQMK DSLINLQNGI RSRDYTSESE EKRNRYH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle