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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114625886
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEFFKAVFV RLRGPELEVT LQYKPGRNPG SGPPSLSSPE PPTDCLTCTN WSSFHTAWQG  60
   61 HGETAPGWPP CHAHTLPGTR PGCLRPPPPS TSATRRGAGR PGGRGGPKAR GGGVTAAPAR 120
  121 VPLNLSSKFS YGVGSPLLKA APFLEIISTS CNTLANHYWC QDLDTPAMQS GDTDPSIAVN 180
  181 LHIISMTSLS HYNLIQKDVP FMLALDREGE KKLSWLGPPR GLEICEAVTK ENASASQKHA 240
  241 SIPSVTCYLP IPTADYGQPF SHPISTPSGI STWLSLPVST PASITSIRVT QKSSGSWAFS 300
  301 SCTYVSGPGV CISSLSCSRV GSSSFRGGLG GGYGGASGMG GIIAIMVNQS LLSPLNLEVD 360
  361 PNIQAVCTQE KEQIKTLNNK FASFIDKVWF LEQQNKVLET KWSLLQQQKM ARSNMDSMLE 420
  421 SYINNLRRQL ETLGQEKLKL EAELGNMQGL GEDFKNKYED EINKHTETEN EFVLIKKDVD 480
  481 EAYMNKAELE SLLEGLTDEI NFLRQLYEEE IRELQSQISD MSMVLSMDYS CSLDMDSIIP 540
  541 EVKVQYEEIA NCSRAEAESM YQIKYEELQK LAGKHGDDLR RTKTEISEMN RNISWLQAET 600
  601 EGLKGQRASL EAAITDAEQR GELAVKDVNA KLSELEAALQ RAKQDMMGQL REYQELMNVG 660
  661 LTLDIEIATY RKLLEGEESR LESGMQNVSI HTKTTSSNAG GLSSAYGGLT SPGIIYRLGS 720
  721 SFGSGADSSS FSRTSSTRAV VVKKIETHDG KLESESSDVL SK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle