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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114615281
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLPCLRGW VGQCVAGLSQ TPQATLAANG AEDSRGGEML PAGEIGASPA APCCSESGDE  60
   61 RKNLEEKSDI NVTVLIGSKQ VSEGTDNGDL PSYVSAFIEK EVGNDLKSLK KLDKLIEQRT 120
  121 VSKMQLEEQV LTISSEIPKR IRSALKNAEE SKQFLNQFLE RETHLFSAIN SHLLTAQPWM 180
  181 DDLGAMISQI EEIERHLAYL KWISQIEELS DNIQQYLMTN NVPEAASTLV SMAELDIKLQ 240
  241 ESSCTHLLGF MRATVKFWHK ILKDKLTSDF EEILAQLHWP FIAPPQSQTV GLSRPASALE 300
  301 IYSYLETLFC QLLKLQTSDE LLTEPKQLPE KYSLPASPSV ILPIQIMLTP LQKRFRYHFR 360
  361 GNRQTNVLSK PEWYLAQVLM WIGNHTEFLD EKIQPILDKV GSLVNARLEF SRGLMMLVLE 420
  421 KLATDIPCLL YDDNLFCHLV DEVLLFEREL HSVHGYPGTF ASCMHILSEE TCFQRWLTVE 480
  481 RKFALQKMDS MLSSEAAWVS QYKDITDVDE MKVPDCAETF MTLLLVITDR YKNLPTASRK 540
  541 LQFLELQKDL VDDFRIRLTQ VMKEETRASL GFRYCAILNA VNYISTVLAD WADNVFFLQL 600
  601 QQAALEVFAE NNTLSKLQLG QLASMESSVF DDMINLLERL KHDMLTRQVD HVFREVKDAA 660
  661 KLYKKERWLS LPSQSEQAVM SLSSSACPLL LTLRDHLLQL EQQLCFSLFK IFWQMLVEKL 720
  721 DVYIYQEIIL ANHFNEGGAA QLQFDMTRNL FPLFSHYCKR PENYFKHIKE ACIVLNLNVG 780
  781 SALLLKDVLQ SASGQLPATA ALNEVGIYKL AQQDVEILLN LRTNWPNTGK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle