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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114607114, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.15
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQLERSAIS GFSSKSRRNS FTYDVKREVY NEETFQQEHK RKASTSGNMN INITTFRHHV  60
   61 QCRCSWHRFL RCMLTVFPFL EWMCMYRLKD WLLGDLLAGI SVGLVQVPQG LTLSLLARQL 120
  121 IPPLNIAYAA FCSSVIYVIF GSCHQMSIGS FFLVSALLIN VLKVSPFNNG QLVMGSFVKN 180
  181 EFSAPSYLMG YNKSLSVVAT TTFLTGIIQL IMGVLGLGYI ATYLPESAMS AYLAAVALHI 240
  241 MLSQLTFIFG IMISFHAGPI SFFYDIINYC VALPKANSTS ILLFLTVVVA LRINKCIRIS 300
  301 FNQYPIEFPM ELFLIIGFTV IANKISMATE TSQTLIDMIP YSFLFPVTPD FSLLPKIILQ 360
  361 AFSLSLVSSF LLIFLGKKIA SLHNYSVNSN QDLIAIGLCN VVSSFFRSCV FTGAIARTII 420
  421 QDKSGGRQQF ASLVGAGVML LLMVKMGHFF YTLPNAVLAG IILSNVIPYL ETISNLPSLW 480
  481 RQDQYDCALW MMTFSSSIFL GLDIGLIISV VSAFFITTVR SHRAKILLLG QIPNTNIYRS 540
  541 INDYREIITI PGVKIFQCCS SITFVNVYYL KHKLLKEVDM VKVPLKEEEI FSLFNSSDTS 600
  601 LQGGKICRCF CNCDDLEPLP RILYTERFEN KLDPEASSVN LIHCSHFESM NASQTASEDQ 660
  661 VPYTVSSVSQ KNQGQQEEVE EVWLPNNSSR NSSPGLPDVA ESQGRRSLIP YSDASLLPSV 720
  721 HTIILDFSMV HYVDSRGLVV LRQICNAFQN ANILILIAGC HSSIVRAFER NDFFDAGITK 780
  781 TQLFLSVHDA VLFALSRKVI GSSELNIDES ETVIRETYSE TDKNDNSRYK MSSSFLGSQK 840
  841 NVSPGFIKIQ QPVEEELELD LELESEQEAG LGLDLDLDRE LEPEMEPKAE TETKTQTEME 900
  901 PQPETEPEME PNPKSRPRAH TFLQQRYWPM YHPSMASTQS QTQTRTWSVE RRRHPMDSYS 960
  961 PEGNSNEDV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle