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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114590784
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGRLGIVV SACLRGRGPR GGLSGRGGGW VAERPGSPRR FRSQAGSGGG GAPRPTRARR  60
   61 SGKKGGASGC ARSGPAVAAE MEEGGRDKAP VQPQQSPAAA PGGTDEKPSG KERRDAGDKD 120
  121 KEQELSEEDK QLQDELEMLV ERLGEKDTSL YRPALEELRR QIRSSTTSMT SVPKPLKFLR 180
  181 PHYGKLKEIY ENMAPGENKR FAADIISVLA MTMSGERECL KYRLVGSQEE LASWGHEYVR 240
  241 HLAGEVAKEW QELDDAEKVQ REPLLTLVKE IVPYNMAHNA EHEACDLLME IEQVDMLEKD 300
  301 IDENAYAKVC LYLTSCVNYV PEPENSALLR CALGVFRKFS RFPEALRLAL MLNDMELVED 360
  361 IFTSCKDVVV QKQMAFMLGR HGVFLELSED VEEYEDLTEI MSNVQLNSNF LALARELDIM 420
  421 EPKVPDDIYK THLENNRFGG SGSQVDSARM NLASSFVNGF VNAAFGQDKL LTDDGNKWLY 480
  481 KNKDHGMLSA AASLGMILLW DVDGGLTQID KYLYSSEDYI KSGALLACGI VNSGVRNECD 540
  541 PALALLSDYV LHNSNTMRLG SIFGLGLAYA GSNREDVLTL LLPVMGDSKS SMEVAGVTAL 600
  601 ACGMIAVGSC NGDVTSTILQ TIMEKSETEL KDTYARWLPL GLGLNHLGKG EAIEAILAAL 660
  661 EVVSEPFRSF ANTLVDVCAY AGSGNVLKVQ QLLHICSEHF DSKEKEEDKD KKEKKDKDKK 720
  721 EAPADMGAHQ GVAVLGIALI AMGEEIGAEM ALRTFGHLLR YGEPTLRRAV PLALALISVS 780
  781 NPRLNILDTL SKFSHDADPE VSYNSIFAMG MVGSGTNNAR LAAMLRQLAQ YHAKDPNNLF 840
  841 MVRLAQGLTH LGKGTLTLCP YHSDRQLMSQ VAVAGLLTVL VSFLDVRNII LGKSHYVLYG 900
  901 LVAAMQPRML VTFDEELRPL PVSVRVGQAV DVVGQAGKPK TITGFQTHTT PVLLAHGERA 960
  961 ELATEEFLPV TPILEGFVIL RKNPNYDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle