YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114555089
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLPSALNV KVKRRRKKKE ESRLLASASA EGFALRKDGR GGFWSQLGAQ YEISGAWAEK  60
   61 TGTSVAFVST DWLKRAPREL TGSAIRWKEF VAPEKSSQSG AVAAAFCGFP LFPQTRTFSA 120
  121 SLRRIVTKMW NSNDGGGFEN YGSSYGGAGG YTQSPGGFGS PAPSQAEKKS RARAQHIVPC 180
  181 TISQLLSATL VDEVFRIGNV EISQVTIVGI IRHAEKAPTN IVYKIDDMTA APMDVRQWVD 240
  241 TDDTSSENTV VPPETYVKVA GHLRSFQNKK SLVAFKIMPL EDMNEFTTHI LEVINAHMVL 300
  301 SKANSQPSAG RAPISNPGMS EAGNFGGNSF MPANGLTVAQ NQVLNLIKAC PRPEGLNFQD 360
  361 LKNQLKHMSV SSIKQAVDFL SNEGHIYSTV DDDHFKSTDA E

Type	Start	End	Confidence
Signal Peptide	1	34	0.69
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	401	0.99