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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6330416
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSRAKKRPQL LRALARVPSP VRNRALGWSW STASNSNRST PACSPILRKR SRSPTPQNQD  60
   61 GDTMVEKGSD HSSDKSPSTP EQGVQRSCSS QSGRSGGKNS KKSQSWYNVL SPTYKQRNED 120
  121 FRKLFKQLPD TERLIVDYSC ALQRDILLQG RLYLSENWIC FYSNIFRWET LLTVRLKDIC 180
  181 SMTKEKTARL IPNAIQVCTD SEKHFFTSFG ARDRTYMMMF RLWQNALLEK PLCPKELWHF 240
  241 VHQCYGNELG LTSDDEDYVP PDDDFNTMGY CEEIPVEENE VNDSSSKSSI ETKPDASPQL 300
  301 PKKSITNSTL TSTGSSEAPV SFDGLPLEEE ALEGDGSLEK ELAIDNIMGE KIEMIAPVNS 360
  361 PSLDFNDNED IPTELSDSSD THDEGEVQAF YEDLSGRQYV NEVFNFSVDK LYDLLFTNSP 420
  421 FQRDFMEQRR FSDIIFHPWK KEENGNQSRV ILYTITLTNP LAPKTATVRE TQTMYKASQE 480
  481 SECYVIDAEV LTHDVPYHDY FYTINRYTLT RVARNKSRLR VSTELRYRKQ PWGLVKTFIE 540
  541 KNFWSGLEDY FRHLESELAK TESTYLAEMH RQSPKEKASK TTTVRRRKRP HAHLRVPHLE 600
  601 EVMSPVTTPT DEDVGHRIKH VAGSTQTRHI PEDTPNGFHL QSVSKLLLVI SCVICFSLVL 660
  661 LVILNMMLFY KLWMLEYTTQ TLTAWQGLRL QERLPQSQTE WAQLLESQQK YHDTELQKWR 720
  721 EIIKSSVMLL DQMKDSLINL QNGIRSRDYT SESEEKRNRY H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle