YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DHODH
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLPWRHLQKR AQDAVIILGG GGLLFASYLM ATGDERFYAE HLMPTLQGLL DPESAHRLAV  60
   61 RFTSLGLLPR ARFQDSDMLE VRVLGHKFRN PVGIAAGFDK HGEAVDGLYK MGFGFVEIGS 120
  121 VTPKPQEGNP RPRVFRLPED QAVINRYGFN SHGLSVVEHR LRARQQKQAK LTEDGLPLGV 180
  181 NLGKNKTSVD AAEDYAEGVR VLGPLADYLV VNVSSPNTAG LRSLQGKAEL RRLLTKVLQE 240
  241 RDGLRRVHRP AVLVKIAPDL TSQDKEDIAS VVKELGIDGL IVTNTTVSRP AGLQGALRSE 300
  301 TGGLSGKPLR DLSTQTIREM YALTQGRVPI IGVGGVSSGQ DALEKIRAGA SLVQLYTALT 360
  361 FWGPPVVGKV KRELEALLKE QGFGGVTDAI GADHRR

Type	Start	End	Confidence
Cytoplasmic	1	13	0.85
Transmembrane Helix	14	32	0.91
Non-Cytoplasmic	33	396	0.97