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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10436768
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMILYCTLLA SAQSEAEKER IMGKMEADPE LSKFLYQLHE TEKEDLIREE RSRRERVRQS  60
   61 RMDTDLETMD LDQGGEALAP RQVLDLEDLV FTQGSHFMAN KRCQLPDGSF RRQRKGYEEV 120
  121 HVPALKPKPF GSEEQLLPVE KLPKYAQAGF EGFKTLNRIQ SKLYRAALET DENLLLCAPT 180
  181 GAGKTNVALM CMLREIGKHI NMDGTINVDD FKIIYIAPMR SLVQEMVGSF GKRLATYGIT 240
  241 VAELTGDHQL CKEEISATQI IVCTPEKWDI ITRKGGERTY TQLVRLIILD EIHLLHDDRG 300
  301 PVLEALVARA IRNIEMTQED VRLIGLSATL PNYEDVATFL RVDPAKGLFY FDNSFRPVPL 360
  361 EQTYVGITEK KAIKRFQIMN EIVYEKIMEH AGKNQVLVFV HSRKETGKTA RAIRDMCLEK 420
  421 DTLGLFLREG SASTEVLRTE AEQCKNLELK DLLPYGFAIH HAGMTRVDRT LVEDLFADKH 480
  481 IQVLVSTATL AWGVNLPAHT VIIKGTQVYS PEKGHWTELG ALDILQMLGR AGRPQYDTKG 540
  541 EGILITSHGE LQYYLSLLNQ QLPIESQMVS KLPDMLNAEI VLGNVQNAKD AVNWLGYAYL 600
  601 YIRMLRSPTL YGISHDDLKG DPLLDQRRLD LVHTAALMLD KNNLVKYDKK TGNFQVTELG 660
  661 RIASHYYITN DTVQTYNQLL KPTLSEIELF RVFSLSSEFK NITVREEEKL ELQKLLERVP 720
  721 IPVKESIEEP SAKINVLLQA FISQLKLEGF ALMADMVYVT QSAGRLMRAI FEIVLNRGWA 780
  781 QLTDKTLNLC KMIDKRMWQS MCPLRQFRKL PEEVVKKIEK KNFPFERLYD LNHNEIGELI 840
  841 RMPKMGKTIH KYVHLFPKLE LSVHLQPITR STLKVELTIT PDFQWDEKVH GSSEAFWILV 900
  901 EDVDSEVILH HEYFLLKAKY AQDEHLITFF VPVFEPLPPQ YFIRVVSDRW LSCETQLPVS 960
  961 FRHLILPEKY PPPTELLDLQ PLPVSALRNS AFESLYRDKF PFFNPIQTQV FNTVYNSDDN1020
 1021 VFVGAPTGSG KTICAEFAIL RMLLQSSEGR CVYITPMEAL AEQVYMDWYE KFQDRLNKKV1080
 1081 VLLTGETSTD LKLLGKGNII ISTPEKWDIL SRRWKQRKNV QNINLFVVDE VHLIGGENGP1140
 1141 VLEVICSRMR NISSQIERPI RIVALSSSLS NAKDVAHWLG CSATSTFNFH PNVRPVPLEL1200
 1201 HIQGFNISHT QTRLLSMAKP VYHAITKHSP KKPVIVFVPS RKQTRLTAID ILTTCAADIQ1260
 1261 RQRFLHCTEK DLIPYLEKLS DSTLKETLLN GVGYLHEGLS PMERRLVEQL FSSGAIQVVV1320
 1321 ASRSLCWGMN VAAHLVIIMD TQYYNGKIHA YVDYPIYDVL QMVGHANRPL QDDEGRCVIM1380
 1381 CQGSKKDFFK KFLYEPLPVE SHLDHCMHDH FNAEIVTKTI ENKQDAVDYL TWTFLYRRMT1440
 1441 QNPNYYNLQG ISHRHLSDHL SELVEQTLSD LEQSKCISIE DEMDVAPLNL GMIAAYYYIN1500
 1501 YTTIELFSMS LNAKTKVRGL IEIISNAAEY ENIPIRHHED NLLRQLAQKV PHKLNNPKFN1560
 1561 DPHVKTNLLL QAHLSRMQLS AELQSDTEEI LSKAIRLIQA CVDVLSSNGW LSPALAAMEL1620
 1621 AQMVTQAMWS KDSYLKQLPH FTSEHIKRCT DKGVESVFDI MEMEDEERNA LLQLTDSQIA1680
 1681 DVARFCNRYP NIELSYEVVD KDSIRRGGPV VVLVQLEREE EVTGPVIAPL FPQKREEGWW1740
 1741 VVIGDAKSNS LISIKRLTLQ QKAKVKLDFV APATGAHNYT LYFMSDAYMG CDQEYKFSVD1800
 1801 VKEAETDSDS D

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