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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27902237
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.15
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQLERSAIS GFSSKSRRNS FAYDVKREVY NEETFQQEHK RKASSSGNMN INITTFRHHV  60
   61 QCRCSWHRFL RCMLTIFPFL EWMCMYRLKD WLLGDLLAGI SVGLVQVPQG LTLSLLARQL 120
  121 IPPLNIAYAA FCSSVIYVIF GSCHQMSVGS FFLVSALLIN VLKVSPFDNG QLVMGSFVKN 180
  181 EFSAPSYLMG YNKSLSVVAT TTFLTGIIQL IMGVLGLGFI ATYLPESAMN AYLAAVALHI 240
  241 MLSQLTFIFG IMISFHAGPI SFFYDIINYC VALPKANSTS ILVFLTVVVA LRINKCIRIS 300
  301 FNQYPIEFPM ELFLIIGFTV IANKISMATE TSQTLIDMIP YSFLLPVTPD FSLLPKIILQ 360
  361 AFSLSLVSSF LLIFLGKKIA SLHNYSVNSN QDLIAIGLCN VVSSFFRSCV FTGAIARTII 420
  421 QDKSGGRQQF ASLVGAGVML LLMVKMGHFF YTLPNAVLAG IILSNVIPYL ETISNLPSLW 480
  481 RQDQYDCALW MMTFSSSIFL GLDIGLIISV VSAFFITTVR SHRAKILLLG QIPNTNIYRS 540
  541 INDYREIITI PGVKIFQCCC SITFVNVYYL KHKLLKEVDM VKVPLKEEEI FSLFNSSDTN 600
  601 LQGGKICRCF CNCDDLEPLP RILYTERFEN KLDPEASSVN LIHCSHFESM NTSQTASEDQ 660
  661 VPYTVSSVSQ KNQGQQYEEV EEVWLPNNSS RNSSPGLPDV AESQGRRSLI PYSDASLLPS 720
  721 VHTIILDFSM VHYVDSRGLV VLRQICNAFQ NANILILIAG CHSSIVRAFE RNDFFDAGIT 780
  781 KTQLFLSVHD AVLFALSRKV IGSSELSIDE SETVIRETYS ETDKNDNSRY KMSSSFLGSQ 840
  841 KNVSPGFIKI QQPVEEESEL DLELESEQEA GLGLDLDLDR ELEPEMEPKA ETETKTQTEM 900
  901 EPQPETEPEM EPNPKSRPRA HTFPQQRYWP MYHPSMASTQ SQTQTRTWSV ERRRHPMDSY 960
  961 SPEGNSNEDV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle