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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: haf-6
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILSKLSQI SIKSAVQSSK HCFSSYPWLH KPISRTTILK TWRICGFGAG LGAVTLRKAA  60
   61 CAPKLSKRID HLRTTEDQNA SMTAGELWNL IKPFFGWFFA AVVCAILSAY INIQIPLCLG 120
  121 DLVNGIVKII KDESNNLRSH FEQLKPSALH LMTLYVAQSA LTFLYITFLT VLGERMATKM 180
  181 RSDLFQKLLH HDMAFFDSHK SGELSARLNA DVQEFKSSFK LCVSQGLRTF AQTIGCIGSL 240
  241 YFLSPTMTMY TVAVVPGIIL AGSAIGAGLR QLSRRAQGQS ATASAVSDEA LTNIRTIRAF 300
  301 AMEKLESRLF DNELDKARAM QEQLGVGIGL FQAGTNLFLN GMILSVLYGG SNLISKGEMT 360
  361 PGALMSFLVS AQTIQRSLSQ LSIIFGTAIK GWTAGGRVLQ FSRLEPSIPM DTGVCIPYHS 420
  421 LWGDIKFEDV SFSYPTRPGH TVFENLTLSI PAGQVVALCG PSGEGKSTIT HLLERFYEPK 480
  481 SGRVTLDGRD LRELNVEWLR GQVIGLISQE PVLFATSVEE NIRYGRPDAT DEEVREAARA 540
  541 AHVDEFVSRF PSGYSTVVGE RGAQLSGGQK QRIAIARAIL KNPPILILDE ATSALDSHSE 600
  601 HMVQEALNNV MKGRTVLIIA HRLSTIRSAQ MIYVIKDKKA LESGTHEQLM AKKGSLYRKL 660
  661 VEAHNVDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle